Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.17■□□□□ 0.82
PDE6BP35913 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 ACTBP11-201ENST00000436287 1126 ntBASIC20.17■□□□□ 0.82
PDE6BP35913 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.17■□□□□ 0.82
PDE6BP35913 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.17■□□□□ 0.82
PDE6BP35913 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDE6BP35913 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.17■□□□□ 0.82
PDE6BP35913 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PDE6BP35913 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.17■□□□□ 0.82
PDE6BP35913 MIR4538-201ENST00000581377 78 ntBASIC20.17■□□□□ 0.82
PDE6BP35913 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.17■□□□□ 0.82
PDE6BP35913 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.17■□□□□ 0.82
PDE6BP35913 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PDE6BP35913 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDE6BP35913 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDE6BP35913 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE6BP35913 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDE6BP35913 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6BP35913 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDE6BP35913 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDE6BP35913 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDE6BP35913 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6BP35913 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PDE6BP35913 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.16■□□□□ 0.82
PDE6BP35913 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.16■□□□□ 0.82
PDE6BP35913 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.16■□□□□ 0.82
PDE6BP35913 USP32P1-208ENST00000506594 1164 ntBASIC20.16■□□□□ 0.82
PDE6BP35913 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6BP35913 AP002490.2-201ENST00000524791 560 ntBASIC20.16■□□□□ 0.82
PDE6BP35913 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.16■□□□□ 0.82
PDE6BP35913 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6BP35913 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6BP35913 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.16■□□□□ 0.82
PDE6BP35913 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDE6BP35913 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 GPAA1P2-202ENST00000606848 1787 ntBASIC20.16■□□□□ 0.82
PDE6BP35913 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDE6BP35913 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6BP35913 AL391256.1-201ENST00000443260 1855 ntBASIC20.16■□□□□ 0.82
PDE6BP35913 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE6BP35913 AC092068.3-201ENST00000587894 2016 ntBASIC20.15■□□□□ 0.82
PDE6BP35913 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE6BP35913 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE6BP35913 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE6BP35913 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDE6BP35913 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PDE6BP35913 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDE6BP35913 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.15■□□□□ 0.82
PDE6BP35913 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE6BP35913 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.15■□□□□ 0.82
PDE6BP35913 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PDE6BP35913 AC233724.13-201ENST00000598383 410 ntBASIC20.15■□□□□ 0.82
PDE6BP35913 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.15■□□□□ 0.82
PDE6BP35913 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PDE6BP35913 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.15■□□□□ 0.82
PDE6BP35913 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE6BP35913 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.15■□□□□ 0.82
PDE6BP35913 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.15■□□□□ 0.82
PDE6BP35913 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PDE6BP35913 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6BP35913 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.14■□□□□ 0.82
PDE6BP35913 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms