Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL4P13236 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.51■□□□□ 0.07
CCL4P13236 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.51■□□□□ 0.07
CCL4P13236 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.51■□□□□ 0.07
CCL4P13236 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.51■□□□□ 0.07
CCL4P13236 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CCL4P13236 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCL4P13236 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.5■□□□□ 0.07
CCL4P13236 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.5■□□□□ 0.07
CCL4P13236 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CCL4P13236 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.5■□□□□ 0.07
CCL4P13236 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CCL4P13236 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.5■□□□□ 0.07
CCL4P13236 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.5■□□□□ 0.07
CCL4P13236 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.5■□□□□ 0.07
CCL4P13236 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.5■□□□□ 0.07
CCL4P13236 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
CCL4P13236 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CCL4P13236 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 PKD1P1-201ENST00000458669 6805 ntBASIC15.5■□□□□ 0.07
CCL4P13236 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CCL4P13236 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCL4P13236 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CCL4P13236 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.5■□□□□ 0.07
CCL4P13236 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CCL4P13236 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CCL4P13236 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 KRT8P12-202ENST00000472924 1397 ntBASIC15.49■□□□□ 0.07
CCL4P13236 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.49■□□□□ 0.07
CCL4P13236 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.49■□□□□ 0.07
CCL4P13236 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.49■□□□□ 0.07
CCL4P13236 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.49■□□□□ 0.07
CCL4P13236 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.49■□□□□ 0.07
CCL4P13236 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.49■□□□□ 0.07
CCL4P13236 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.49■□□□□ 0.07
CCL4P13236 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 GGT4P-201ENST00000623672 1708 ntBASIC15.49■□□□□ 0.07
CCL4P13236 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CCL4P13236 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCL4P13236 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CCL4P13236 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CCL4P13236 U91328.1-201ENST00000437528 223 ntBASIC15.49■□□□□ 0.07
CCL4P13236 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.49■□□□□ 0.07
CCL4P13236 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.49■□□□□ 0.07
CCL4P13236 SERBP1P3-201ENST00000459980 809 ntBASIC15.49■□□□□ 0.07
CCL4P13236 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.49■□□□□ 0.07
CCL4P13236 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CCL4P13236 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.49■□□□□ 0.07
CCL4P13236 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.49■□□□□ 0.07
CCL4P13236 AL359881.2-201ENST00000602973 570 ntBASIC15.49■□□□□ 0.07
CCL4P13236 AC008494.3-201ENST00000606615 944 ntBASIC15.49■□□□□ 0.07
CCL4P13236 AL033527.5-202ENST00000641632 1098 ntBASIC15.49■□□□□ 0.07
CCL4P13236 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 AL603756.1-201ENST00000606511 2163 ntBASIC15.49■□□□□ 0.07
CCL4P13236 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CCL4P13236 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCL4P13236 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CCL4P13236 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CCL4P13236 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.48■□□□□ 0.07
CCL4P13236 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.48■□□□□ 0.07
CCL4P13236 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.48■□□□□ 0.07
CCL4P13236 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCL4P13236 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.48■□□□□ 0.07
CCL4P13236 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CCL4P13236 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CCL4P13236 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms