Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 LINC01144-201ENST00000626198 1710 ntBASIC18.98■□□□□ 0.63
BMP3P12645 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.98■□□□□ 0.63
BMP3P12645 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.98■□□□□ 0.63
BMP3P12645 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP3P12645 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.98■□□□□ 0.63
BMP3P12645 AC002472.2-201ENST00000442739 958 ntBASIC18.98■□□□□ 0.63
BMP3P12645 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP3P12645 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP3P12645 AC061975.2-201ENST00000581722 295 ntBASIC18.98■□□□□ 0.63
BMP3P12645 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.98■□□□□ 0.63
BMP3P12645 AL589739.1-201ENST00000607720 493 ntBASIC18.98■□□□□ 0.63
BMP3P12645 AL133215.2-201ENST00000609242 977 ntBASIC18.98■□□□□ 0.63
BMP3P12645 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
BMP3P12645 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.98■□□□□ 0.63
BMP3P12645 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
BMP3P12645 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
BMP3P12645 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
BMP3P12645 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.98■□□□□ 0.63
BMP3P12645 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.98■□□□□ 0.63
BMP3P12645 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.98■□□□□ 0.63
BMP3P12645 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BMP3P12645 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
BMP3P12645 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
BMP3P12645 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.97■□□□□ 0.63
BMP3P12645 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BMP3P12645 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
BMP3P12645 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.97■□□□□ 0.63
BMP3P12645 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BMP3P12645 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
BMP3P12645 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.97■□□□□ 0.63
BMP3P12645 MRPS18AP1-201ENST00000414458 589 ntBASIC18.97■□□□□ 0.63
BMP3P12645 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
BMP3P12645 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.97■□□□□ 0.63
BMP3P12645 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.97■□□□□ 0.63
BMP3P12645 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
BMP3P12645 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.97■□□□□ 0.63
BMP3P12645 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.97■□□□□ 0.63
BMP3P12645 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.97■□□□□ 0.63
BMP3P12645 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.97■□□□□ 0.63
BMP3P12645 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.97■□□□□ 0.63
BMP3P12645 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.97■□□□□ 0.63
BMP3P12645 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.97■□□□□ 0.63
BMP3P12645 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.97■□□□□ 0.63
BMP3P12645 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 UBALD1-205ENST00000590891 2641 ntBASIC18.97■□□□□ 0.63
BMP3P12645 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
BMP3P12645 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 AC005622.1-201ENST00000636801 1703 ntBASIC18.97■□□□□ 0.63
BMP3P12645 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.97■□□□□ 0.63
BMP3P12645 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
BMP3P12645 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.96■□□□□ 0.63
BMP3P12645 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BMP3P12645 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.96■□□□□ 0.63
BMP3P12645 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BMP3P12645 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BMP3P12645 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
BMP3P12645 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.96■□□□□ 0.63
BMP3P12645 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
BMP3P12645 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 RPL37AP1-201ENST00000412502 279 ntBASIC18.96■□□□□ 0.63
BMP3P12645 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.96■□□□□ 0.63
BMP3P12645 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 FAM207CP-201ENST00000443486 507 ntBASIC18.96■□□□□ 0.63
BMP3P12645 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
BMP3P12645 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.96■□□□□ 0.63
BMP3P12645 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.96■□□□□ 0.63
BMP3P12645 TEX28P1-201ENST00000613479 1221 ntBASIC18.96■□□□□ 0.63
BMP3P12645 TEX28P2-201ENST00000617764 1221 ntBASIC18.96■□□□□ 0.63
BMP3P12645 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BMP3P12645 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.96■□□□□ 0.63
BMP3P12645 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms