Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC28.38■■■□□ 2.13
TOP2AP11388 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC28.38■■■□□ 2.13
TOP2AP11388 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC28.38■■■□□ 2.13
TOP2AP11388 AC093525.8-201ENST00000624099 1342 ntBASIC28.38■■■□□ 2.13
TOP2AP11388 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TOP2AP11388 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TOP2AP11388 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TOP2AP11388 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TOP2AP11388 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC28.37■■■□□ 2.13
TOP2AP11388 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TOP2AP11388 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC28.37■■■□□ 2.13
TOP2AP11388 PKIG-203ENST00000372887 769 ntTSL 3 BASIC28.37■■■□□ 2.13
TOP2AP11388 STX1A-203ENST00000395155 783 ntTSL 2 BASIC28.37■■■□□ 2.13
TOP2AP11388 AC004987.2-201ENST00000395959 1148 ntBASIC28.37■■■□□ 2.13
TOP2AP11388 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC28.37■■■□□ 2.13
TOP2AP11388 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC28.37■■■□□ 2.13
TOP2AP11388 HNRNPA1P13-201ENST00000510646 963 ntBASIC28.37■■■□□ 2.13
TOP2AP11388 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TOP2AP11388 SNX12-206ENST00000622259 661 ntTSL 5 BASIC28.37■■■□□ 2.13
TOP2AP11388 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC28.37■■■□□ 2.13
TOP2AP11388 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TOP2AP11388 TUBB1P2-201ENST00000422712 1306 ntBASIC28.37■■■□□ 2.13
TOP2AP11388 TUBB1P1-201ENST00000503144 1300 ntBASIC28.37■■■□□ 2.13
TOP2AP11388 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC28.37■■■□□ 2.13
TOP2AP11388 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC28.37■■■□□ 2.13
TOP2AP11388 AL691432.1-201ENST00000596308 1422 ntBASIC28.37■■■□□ 2.13
TOP2AP11388 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
TOP2AP11388 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TOP2AP11388 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC28.36■■■□□ 2.13
TOP2AP11388 AC078925.2-201ENST00000624013 1973 ntBASIC28.36■■■□□ 2.13
TOP2AP11388 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC28.36■■■□□ 2.13
TOP2AP11388 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TOP2AP11388 AC005229.1-201ENST00000392885 409 ntBASIC28.36■■■□□ 2.13
TOP2AP11388 KRT18P64-201ENST00000434946 1219 ntBASIC28.36■■■□□ 2.13
TOP2AP11388 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC28.36■■■□□ 2.13
TOP2AP11388 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC28.36■■■□□ 2.13
TOP2AP11388 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC28.36■■■□□ 2.13
TOP2AP11388 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
TOP2AP11388 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC28.36■■■□□ 2.13
TOP2AP11388 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC28.36■■■□□ 2.13
TOP2AP11388 GNRHR2-203ENST00000581100 1187 ntBASIC28.36■■■□□ 2.13
TOP2AP11388 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC28.36■■■□□ 2.13
TOP2AP11388 AL592424.1-201ENST00000563624 1536 ntBASIC28.36■■■□□ 2.13
TOP2AP11388 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TOP2AP11388 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TOP2AP11388 LETM1P2-201ENST00000597330 2178 ntBASIC28.36■■■□□ 2.13
TOP2AP11388 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
TOP2AP11388 AC139713.2-201ENST00000641328 2723 ntBASIC28.35■■■□□ 2.13
TOP2AP11388 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC28.35■■■□□ 2.13
TOP2AP11388 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC28.35■■■□□ 2.13
TOP2AP11388 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TOP2AP11388 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC28.35■■■□□ 2.13
TOP2AP11388 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC28.35■■■□□ 2.13
TOP2AP11388 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC28.35■■■□□ 2.13
TOP2AP11388 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TOP2AP11388 AL583810.1-201ENST00000553344 1045 ntBASIC28.35■■■□□ 2.13
TOP2AP11388 PIGL-212ENST00000581006 554 ntTSL 4 BASIC28.35■■■□□ 2.13
TOP2AP11388 MIR4538-201ENST00000581377 78 ntBASIC28.35■■■□□ 2.13
TOP2AP11388 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC28.35■■■□□ 2.13
TOP2AP11388 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC28.35■■■□□ 2.13
TOP2AP11388 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC28.35■■■□□ 2.13
TOP2AP11388 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC28.35■■■□□ 2.13
TOP2AP11388 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
TOP2AP11388 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TOP2AP11388 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TOP2AP11388 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC28.34■■■□□ 2.13
TOP2AP11388 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
TOP2AP11388 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 TOMM22P5-201ENST00000416399 439 ntBASIC28.34■■■□□ 2.13
TOP2AP11388 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC28.34■■■□□ 2.13
TOP2AP11388 FAM86LP-201ENST00000478302 853 ntBASIC28.34■■■□□ 2.13
TOP2AP11388 HNRNPUP1-201ENST00000554987 333 ntBASIC28.34■■■□□ 2.13
TOP2AP11388 AL049840.4-201ENST00000602422 811 ntBASIC28.34■■■□□ 2.13
TOP2AP11388 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC28.34■■■□□ 2.13
TOP2AP11388 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
TOP2AP11388 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TOP2AP11388 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC28.33■■■□□ 2.13
TOP2AP11388 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
TOP2AP11388 LBX2-201ENST00000341396 886 ntTSL 3 BASIC28.33■■■□□ 2.13
TOP2AP11388 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC28.33■■■□□ 2.13
TOP2AP11388 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC28.33■■■□□ 2.13
TOP2AP11388 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC28.33■■■□□ 2.13
TOP2AP11388 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC28.33■■■□□ 2.13
TOP2AP11388 AL359711.2-201ENST00000563105 872 ntBASIC28.33■■■□□ 2.13
TOP2AP11388 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC28.33■■■□□ 2.13
TOP2AP11388 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
TOP2AP11388 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TOP2AP11388 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC28.33■■■□□ 2.13
TOP2AP11388 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC28.33■■■□□ 2.13
TOP2AP11388 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TOP2AP11388 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC28.33■■■□□ 2.13
TOP2AP11388 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms