Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC068587.3-201ENST00000526613 355 ntBASIC16.42■□□□□ 0.22
PDGFBP01127 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFBP01127 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFBP01127 AL391069.4-201ENST00000609583 481 ntBASIC16.42■□□□□ 0.22
PDGFBP01127 AC244669.2-201ENST00000612320 853 ntBASIC16.42■□□□□ 0.22
PDGFBP01127 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.42■□□□□ 0.22
PDGFBP01127 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDGFBP01127 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDGFBP01127 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFBP01127 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFBP01127 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDGFBP01127 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PDGFBP01127 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDGFBP01127 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
PDGFBP01127 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 MIR326-201ENST00000362220 95 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDGFBP01127 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
PDGFBP01127 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.41■□□□□ 0.22
PDGFBP01127 FXNP2-201ENST00000411625 547 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFBP01127 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFBP01127 HIST3H2BA-201ENST00000436555 524 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFBP01127 AL139010.1-201ENST00000454878 894 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.41■□□□□ 0.22
PDGFBP01127 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.41■□□□□ 0.22
PDGFBP01127 ACTG1P17-201ENST00000558391 1119 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.41■□□□□ 0.22
PDGFBP01127 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.41■□□□□ 0.22
PDGFBP01127 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFBP01127 LINC01115-203ENST00000606068 577 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.41■□□□□ 0.22
PDGFBP01127 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.41■□□□□ 0.22
PDGFBP01127 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.41■□□□□ 0.22
PDGFBP01127 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDGFBP01127 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 SNX33P1-201ENST00000592116 1762 ntBASIC16.41■□□□□ 0.22
PDGFBP01127 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFBP01127 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
PDGFBP01127 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.4■□□□□ 0.22
PDGFBP01127 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PDGFBP01127 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.4■□□□□ 0.22
PDGFBP01127 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFBP01127 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.4■□□□□ 0.22
PDGFBP01127 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PDGFBP01127 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFBP01127 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.4■□□□□ 0.22
PDGFBP01127 AC036164.1-201ENST00000570544 333 ntBASIC16.4■□□□□ 0.22
PDGFBP01127 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.4■□□□□ 0.22
PDGFBP01127 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.4■□□□□ 0.22
PDGFBP01127 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDGFBP01127 U62317.3-201ENST00000608319 855 ntBASIC16.4■□□□□ 0.22
PDGFBP01127 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PDGFBP01127 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 AL158212.4-201ENST00000624062 1286 ntBASIC16.4■□□□□ 0.22
PDGFBP01127 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PDGFBP01127 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFBP01127 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms