Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC080080.1-201ENST00000625121 2420 ntBASIC16.11■□□□□ 0.17
C4orf47A7E2U8 AL355312.1-201ENST00000407115 2176 ntBASIC16.11■□□□□ 0.17
C4orf47A7E2U8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 TPRX2P-201ENST00000535362 881 ntBASIC16.11■□□□□ 0.17
C4orf47A7E2U8 SNX29P1-201ENST00000548357 1007 ntBASIC16.11■□□□□ 0.17
C4orf47A7E2U8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 GPR182-203ENST00000622922 591 ntBASIC16.11■□□□□ 0.17
C4orf47A7E2U8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
C4orf47A7E2U8 AC141586.5-201ENST00000624546 2050 ntBASIC16.1■□□□□ 0.17
C4orf47A7E2U8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 ELK1P1-201ENST00000485699 580 ntBASIC16.1■□□□□ 0.17
C4orf47A7E2U8 AC098859.1-201ENST00000502915 1238 ntBASIC16.1■□□□□ 0.17
C4orf47A7E2U8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.1■□□□□ 0.17
C4orf47A7E2U8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
C4orf47A7E2U8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 AC073439.1-201ENST00000624121 1774 ntBASIC16.09■□□□□ 0.17
C4orf47A7E2U8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.09■□□□□ 0.17
C4orf47A7E2U8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms