Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN11AQ9UI33 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.92■□□□□ 0.94
SCN11AQ9UI33 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 AC106886.1-201ENST00000568660 600 ntBASIC20.91■□□□□ 0.94
SCN11AQ9UI33 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 AL008721.1-201ENST00000609964 604 ntBASIC20.91■□□□□ 0.94
SCN11AQ9UI33 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN11AQ9UI33 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 FO393414.2-201ENST00000405153 598 ntBASIC20.9■□□□□ 0.94
SCN11AQ9UI33 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 TARDBPP1-201ENST00000442013 1203 ntBASIC20.9■□□□□ 0.94
SCN11AQ9UI33 MYCLP2-201ENST00000449268 967 ntBASIC20.9■□□□□ 0.94
SCN11AQ9UI33 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 AC010319.3-201ENST00000597028 470 ntBASIC20.9■□□□□ 0.94
SCN11AQ9UI33 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN11AQ9UI33 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCN11AQ9UI33 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCN11AQ9UI33 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.89■□□□□ 0.94
SCN11AQ9UI33 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
SCN11AQ9UI33 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC20.89■□□□□ 0.94
SCN11AQ9UI33 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 HLA-V-201ENST00000429037 534 ntBASIC20.89■□□□□ 0.93
SCN11AQ9UI33 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 RARRES2P5-201ENST00000564013 466 ntBASIC20.89■□□□□ 0.93
SCN11AQ9UI33 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN11AQ9UI33 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms