Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PIF1Q9H611 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.9■□□□□ 0.14
PIF1Q9H611 AC023824.1-201ENST00000562945 2975 ntBASIC15.9■□□□□ 0.14
PIF1Q9H611 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
PIF1Q9H611 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 Z69720.1-201ENST00000601483 472 ntBASIC15.9■□□□□ 0.14
PIF1Q9H611 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.9■□□□□ 0.14
PIF1Q9H611 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.9■□□□□ 0.14
PIF1Q9H611 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 AC006277.1-201ENST00000624348 1610 ntBASIC15.9■□□□□ 0.14
PIF1Q9H611 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.9■□□□□ 0.14
PIF1Q9H611 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.9■□□□□ 0.14
PIF1Q9H611 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 AC243591.1-201ENST00000452967 1364 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 AC067930.6-201ENST00000623257 4947 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 KRT8P49-201ENST00000604166 1432 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 AP002414.1-201ENST00000391405 1147 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 AP002383.4-201ENST00000442518 975 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 BNIP3P18-201ENST00000593976 575 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.89■□□□□ 0.13
PIF1Q9H611 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.89■□□□□ 0.13
PIF1Q9H611 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 NSUN5P1-202ENST00000421140 1535 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 NSUN5P2-203ENST00000457352 1529 ntBASIC15.89■□□□□ 0.13
PIF1Q9H611 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PIF1Q9H611 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.88■□□□□ 0.13
PIF1Q9H611 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PIF1Q9H611 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.88■□□□□ 0.13
PIF1Q9H611 SPDYE21P-201ENST00000413323 827 ntBASIC15.88■□□□□ 0.13
PIF1Q9H611 UPK3BP1-201ENST00000428678 509 ntBASIC15.88■□□□□ 0.13
PIF1Q9H611 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.88■□□□□ 0.13
PIF1Q9H611 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.88■□□□□ 0.13
PIF1Q9H611 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.88■□□□□ 0.13
PIF1Q9H611 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.88■□□□□ 0.13
PIF1Q9H611 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.88■□□□□ 0.13
PIF1Q9H611 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.88■□□□□ 0.13
PIF1Q9H611 TPSP2-201ENST00000561760 610 ntBASIC15.88■□□□□ 0.13
PIF1Q9H611 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms