Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 RARRES2P8-201ENST00000566335 367 ntBASIC17.43■□□□□ 0.38
LHX5Q9H2C1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 AC005829.1-201ENST00000570002 483 ntBASIC17.43■□□□□ 0.38
LHX5Q9H2C1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 C20orf181-201ENST00000623918 480 ntBASIC17.43■□□□□ 0.38
LHX5Q9H2C1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 REXO1L8P-201ENST00000604378 1897 ntBASIC17.43■□□□□ 0.38
LHX5Q9H2C1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LHX5Q9H2C1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 AL592424.1-201ENST00000563624 1536 ntBASIC17.42■□□□□ 0.38
LHX5Q9H2C1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 DNAJB3-202ENST00000449667 1266 ntBASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ALG1L5P-201ENST00000482043 771 ntBASIC17.42■□□□□ 0.38
LHX5Q9H2C1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 AC006449.6-201ENST00000612330 2296 ntBASIC17.42■□□□□ 0.38
LHX5Q9H2C1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.42■□□□□ 0.38
LHX5Q9H2C1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 U82695.1-201ENST00000635752 1889 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 AC073439.1-201ENST00000624121 1774 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 AL355306.1-201ENST00000415580 579 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 AL671277.1-201ENST00000429656 993 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 FAM58CP-201ENST00000435741 640 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 MKNK2P1-201ENST00000437526 628 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 FAM86C2P-203ENST00000528684 1004 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.41■□□□□ 0.38
LHX5Q9H2C1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.41■□□□□ 0.38
LHX5Q9H2C1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms