Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 AC112482.1-201ENST00000492080 688 ntBASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 KRT8P48-201ENST00000515599 1220 ntBASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AL589702.1-201ENST00000641229 1509 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 MIR346-201ENST00000362234 95 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 SPDYE11-202ENST00000450699 704 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 SPDYE9P-201ENST00000570642 692 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 SPDYE10P-202ENST00000612005 668 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 SPDYE8P-202ENST00000612377 668 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AC084121.4-201ENST00000641598 221 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AF228730.8-201ENST00000642140 221 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AL596087.1-201ENST00000400979 1969 ntBASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTHRC1Q96CG8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 FOXO1B-201ENST00000504678 1527 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 MIR1233-2-201ENST00000408138 82 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 MIR1233-1-201ENST00000408722 82 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 SPCS2P4-201ENST00000436160 681 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AC079140.1-201ENST00000508039 487 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AC105233.2-201ENST00000523697 349 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AF228730.5-201ENST00000530288 346 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AC027307.2-201ENST00000591252 911 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AC010327.4-202ENST00000591484 748 ntBASIC15.28■□□□□ 0.04
CTHRC1Q96CG8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms