Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AC093724.1-201ENST00000448659 1027 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AC124947.2-201ENST00000547118 1133 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 RN7SL828P-201ENST00000607615 303 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 HLA-H-201ENST00000383620 1096 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 TPRX2P-201ENST00000535362 881 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 BRWD1P1-201ENST00000401091 371 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 AL033527.5-202ENST00000641632 1098 ntBASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VPS13BQ7Z7G8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 BCRP2-202ENST00000447763 634 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 BCRP6-201ENST00000510112 632 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 BCRP7-201ENST00000511549 544 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC060834.1-201ENST00000443027 2032 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC092171.3-201ENST00000610122 2651 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms