Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.05■□□□□ -0
SHFQ7M4L6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.05■□□□□ -0
SHFQ7M4L6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHFQ7M4L6 PRAL-201ENST00000624952 3286 ntBASIC15.04■□□□□ -0
SHFQ7M4L6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SHFQ7M4L6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.04■□□□□ -0
SHFQ7M4L6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.04■□□□□ -0
SHFQ7M4L6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.04■□□□□ -0
SHFQ7M4L6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
SHFQ7M4L6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.04■□□□□ -0
SHFQ7M4L6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
SHFQ7M4L6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.04■□□□□ -0
SHFQ7M4L6 GGT3P-204ENST00000453783 1664 ntBASIC15.04■□□□□ -0
SHFQ7M4L6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 FLJ16779-201ENST00000612722 7638 ntBASIC15.04■□□□□ -0
SHFQ7M4L6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.04■□□□□ -0
SHFQ7M4L6 AC243591.1-201ENST00000452967 1364 ntBASIC15.04■□□□□ -0
SHFQ7M4L6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.04■□□□□ -0
SHFQ7M4L6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.04■□□□□ -0
SHFQ7M4L6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.04■□□□□ -0
SHFQ7M4L6 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.04■□□□□ -0
SHFQ7M4L6 AC099336.1-202ENST00000602961 463 ntBASIC15.04■□□□□ -0
SHFQ7M4L6 AL591684.3-201ENST00000605187 298 ntBASIC15.04■□□□□ -0
SHFQ7M4L6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.04■□□□□ -0
SHFQ7M4L6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SHFQ7M4L6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
SHFQ7M4L6 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SHFQ7M4L6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.04■□□□□ -0
SHFQ7M4L6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.03■□□□□ -0
SHFQ7M4L6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.03■□□□□ -0
SHFQ7M4L6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.03■□□□□ -0
SHFQ7M4L6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.03■□□□□ -0
SHFQ7M4L6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.03■□□□□ -0
SHFQ7M4L6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SHFQ7M4L6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.03■□□□□ -0
SHFQ7M4L6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.03■□□□□ -0
SHFQ7M4L6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SHFQ7M4L6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.02■□□□□ -0
SHFQ7M4L6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SHFQ7M4L6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SHFQ7M4L6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.02■□□□□ -0
SHFQ7M4L6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.02■□□□□ -0
SHFQ7M4L6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.02■□□□□ -0
SHFQ7M4L6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.02■□□□□ -0
SHFQ7M4L6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.02■□□□□ -0
SHFQ7M4L6 PRYP5-201ENST00000451909 266 ntBASIC15.02■□□□□ -0
SHFQ7M4L6 KRT16P4-201ENST00000453883 522 ntBASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms