Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
KCNIP4Q6PIL6 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
KCNIP4Q6PIL6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
KCNIP4Q6PIL6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
KCNIP4Q6PIL6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AL359258.3-201ENST00000622910 2331 ntBASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 MYCLP1-201ENST00000372451 1075 ntBASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 CA15P1-201ENST00000481698 905 ntBASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 AL049637.2-201ENST00000641778 930 ntBASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.89□□□□□ -0.35
KCNIP4Q6PIL6 KRT17P2-201ENST00000300992 1314 ntBASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 UNC93B2-201ENST00000285383 730 ntBASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 AC026396.1-201ENST00000419388 421 ntBASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 MFAP1P1-201ENST00000442257 1255 ntBASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 AC011506.1-201ENST00000474329 610 ntBASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 AC233702.5-201ENST00000584107 538 ntBASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.88□□□□□ -0.35
KCNIP4Q6PIL6 AC026471.5-201ENST00000615068 467 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms