Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 RPL13AP23-201ENST00000480739 586 ntBASIC19.79■□□□□ 0.76
RNF20Q5VTR2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF20Q5VTR2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 IL9RP2-201ENST00000423948 1312 ntBASIC19.78■□□□□ 0.76
RNF20Q5VTR2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 AL121894.2-201ENST00000602977 491 ntBASIC19.78■□□□□ 0.76
RNF20Q5VTR2 AC064836.3-201ENST00000607928 673 ntBASIC19.78■□□□□ 0.76
RNF20Q5VTR2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF20Q5VTR2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 AL590627.1-203ENST00000421194 1026 ntBASIC19.77■□□□□ 0.76
RNF20Q5VTR2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF20Q5VTR2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF20Q5VTR2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF20Q5VTR2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RNF20Q5VTR2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
RNF20Q5VTR2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 AL513523.2-202ENST00000427283 2040 ntBASIC19.76■□□□□ 0.75
RNF20Q5VTR2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF20Q5VTR2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms