Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.17■□□□□ 0.5
KCNA1Q09470 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.17■□□□□ 0.5
KCNA1Q09470 AC112482.1-201ENST00000492080 688 ntBASIC18.17■□□□□ 0.5
KCNA1Q09470 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 AC010327.4-202ENST00000591484 748 ntBASIC18.17■□□□□ 0.5
KCNA1Q09470 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
KCNA1Q09470 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.17■□□□□ 0.5
KCNA1Q09470 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.17■□□□□ 0.5
KCNA1Q09470 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.17■□□□□ 0.5
KCNA1Q09470 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
KCNA1Q09470 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.17■□□□□ 0.5
KCNA1Q09470 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.17■□□□□ 0.5
KCNA1Q09470 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.17■□□□□ 0.5
KCNA1Q09470 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.17■□□□□ 0.5
KCNA1Q09470 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
KCNA1Q09470 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
KCNA1Q09470 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
KCNA1Q09470 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
KCNA1Q09470 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 LINC02199-201ENST00000506655 2702 ntBASIC18.16■□□□□ 0.5
KCNA1Q09470 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNA1Q09470 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.16■□□□□ 0.5
KCNA1Q09470 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
KCNA1Q09470 AL355306.1-201ENST00000415580 579 ntBASIC18.16■□□□□ 0.5
KCNA1Q09470 BX842568.4-201ENST00000421222 227 ntBASIC18.16■□□□□ 0.5
KCNA1Q09470 HTR5BP-201ENST00000430851 1154 ntBASIC18.16■□□□□ 0.5
KCNA1Q09470 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.16■□□□□ 0.5
KCNA1Q09470 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.16■□□□□ 0.5
KCNA1Q09470 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KCNA1Q09470 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.16■□□□□ 0.5
KCNA1Q09470 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNA1Q09470 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.16■□□□□ 0.5
KCNA1Q09470 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
KCNA1Q09470 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 TNRC18P3-201ENST00000441896 2691 ntBASIC18.16■□□□□ 0.5
KCNA1Q09470 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.16■□□□□ 0.5
KCNA1Q09470 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNA1Q09470 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
KCNA1Q09470 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
KCNA1Q09470 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
KCNA1Q09470 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.16■□□□□ 0.5
KCNA1Q09470 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA1Q09470 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA1Q09470 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA1Q09470 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA1Q09470 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.15■□□□□ 0.5
KCNA1Q09470 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
KCNA1Q09470 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KCNA1Q09470 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA1Q09470 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
KCNA1Q09470 RPSAP43-201ENST00000402237 625 ntBASIC18.15■□□□□ 0.5
KCNA1Q09470 GPX1P2-201ENST00000429271 606 ntBASIC18.15■□□□□ 0.5
KCNA1Q09470 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.15■□□□□ 0.5
KCNA1Q09470 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.15■□□□□ 0.5
KCNA1Q09470 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.15■□□□□ 0.5
KCNA1Q09470 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.15■□□□□ 0.5
KCNA1Q09470 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.15■□□□□ 0.5
KCNA1Q09470 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.15■□□□□ 0.5
KCNA1Q09470 AL138918.1-201ENST00000568306 659 ntBASIC18.15■□□□□ 0.5
KCNA1Q09470 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA1Q09470 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms