Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UBA52P62987 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBA52P62987 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
UBA52P62987 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.38□□□□□ -0.11
UBA52P62987 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 AL024508.2-201ENST00000607749 1894 ntBASIC14.38□□□□□ -0.11
UBA52P62987 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.38□□□□□ -0.11
UBA52P62987 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.38□□□□□ -0.11
UBA52P62987 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 MED15P5-201ENST00000423150 992 ntBASIC14.38□□□□□ -0.11
UBA52P62987 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 AC005104.2-201ENST00000427818 678 ntBASIC14.38□□□□□ -0.11
UBA52P62987 RPS2P1-201ENST00000434010 821 ntBASIC14.38□□□□□ -0.11
UBA52P62987 ABCD1P5-201ENST00000445663 754 ntBASIC14.38□□□□□ -0.11
UBA52P62987 IGHV3-22-201ENST00000520721 359 ntBASIC14.38□□□□□ -0.11
UBA52P62987 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.38□□□□□ -0.11
UBA52P62987 SART3-203ENST00000546611 1184 ntBASIC14.38□□□□□ -0.11
UBA52P62987 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.38□□□□□ -0.11
UBA52P62987 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 AC125634.1-201ENST00000438758 1403 ntBASIC14.38□□□□□ -0.11
UBA52P62987 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
UBA52P62987 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.38□□□□□ -0.11
UBA52P62987 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
UBA52P62987 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBA52P62987 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.37□□□□□ -0.11
UBA52P62987 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.37□□□□□ -0.11
UBA52P62987 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.37□□□□□ -0.11
UBA52P62987 OR7E14P-202ENST00000530490 1290 ntBASIC14.37□□□□□ -0.11
UBA52P62987 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.37□□□□□ -0.11
UBA52P62987 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.37□□□□□ -0.11
UBA52P62987 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 AC140113.2-201ENST00000604370 208 ntBASIC14.37□□□□□ -0.11
UBA52P62987 FAM197Y3-203ENST00000618346 717 ntBASIC14.37□□□□□ -0.11
UBA52P62987 AL691403.2-201ENST00000618460 490 ntBASIC14.37□□□□□ -0.11
UBA52P62987 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.37□□□□□ -0.11
UBA52P62987 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
UBA52P62987 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
UBA52P62987 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms