Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 NUS1P1-201ENST00000446295 882 ntBASIC11.77□□□□□ -0.53
RPL39P62891 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.77□□□□□ -0.53
RPL39P62891 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
RPL39P62891 AD001527.2-201ENST00000622994 785 ntBASIC11.77□□□□□ -0.53
RPL39P62891 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 AL139011.1-202ENST00000642063 584 ntBASIC11.77□□□□□ -0.53
RPL39P62891 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.77□□□□□ -0.53
RPL39P62891 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.77□□□□□ -0.53
RPL39P62891 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 TNRC18P2-201ENST00000417666 2714 ntBASIC11.77□□□□□ -0.53
RPL39P62891 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RPL39P62891 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.77□□□□□ -0.53
RPL39P62891 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.77□□□□□ -0.53
RPL39P62891 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.77□□□□□ -0.53
RPL39P62891 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RPL39P62891 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
RPL39P62891 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 ACTG1P4-201ENST00000425123 1122 ntBASIC11.76□□□□□ -0.53
RPL39P62891 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.76□□□□□ -0.53
RPL39P62891 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 AC013467.2-201ENST00000605472 835 ntBASIC11.76□□□□□ -0.53
RPL39P62891 AL353801.3-201ENST00000609898 542 ntBASIC11.76□□□□□ -0.53
RPL39P62891 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 AC002310.6-201ENST00000624451 1377 ntBASIC11.76□□□□□ -0.53
RPL39P62891 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.76□□□□□ -0.53
RPL39P62891 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RPL39P62891 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.76□□□□□ -0.53
RPL39P62891 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RPL39P62891 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RPL39P62891 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.75□□□□□ -0.53
RPL39P62891 AC148477.5-201ENST00000625164 1645 ntBASIC11.75□□□□□ -0.53
RPL39P62891 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC11.75□□□□□ -0.53
RPL39P62891 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms