Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 DUX4L27-201ENST00000554796 1261 ntBASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAIPQ9BWF2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAIPQ9BWF2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
TRAIPQ9BWF2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.14■□□□□ 0.5
TRAIPQ9BWF2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAIPQ9BWF2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAIPQ9BWF2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAIPQ9BWF2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 AC055876.3-201ENST00000431496 288 ntBASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 AC140878.1-201ENST00000565277 250 ntBASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 AC138649.4-201ENST00000612222 287 ntBASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAIPQ9BWF2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AC008677.1-201ENST00000519230 1561 ntBASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AC142381.1-201ENST00000426099 345 ntBASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAIPQ9BWF2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAIPQ9BWF2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TRAIPQ9BWF2 AC006277.1-201ENST00000624348 1610 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms