Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CTHRC1Q96CG8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 RPSAP43-201ENST00000402237 625 ntBASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 UPF3AP3-201ENST00000420996 769 ntBASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 PRYP6-201ENST00000514804 343 ntBASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 LINC01225-203ENST00000563550 1244 ntBASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AL138918.1-201ENST00000568306 659 ntBASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AC008267.7-201ENST00000624570 1194 ntBASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 PCDH8P1-201ENST00000428983 2773 ntBASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
CTHRC1Q96CG8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.3■□□□□ 0.04
CTHRC1Q96CG8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms