Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF140P52738 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.47■□□□□ 0.23
ZNF140P52738 ADH5P3-201ENST00000433842 1137 ntBASIC16.47■□□□□ 0.23
ZNF140P52738 FAM58CP-201ENST00000435741 640 ntBASIC16.47■□□□□ 0.23
ZNF140P52738 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.47■□□□□ 0.23
ZNF140P52738 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.47■□□□□ 0.23
ZNF140P52738 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.47■□□□□ 0.23
ZNF140P52738 AC006449.6-201ENST00000612330 2296 ntBASIC16.47■□□□□ 0.23
ZNF140P52738 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.47■□□□□ 0.23
ZNF140P52738 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ZNF140P52738 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF140P52738 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.46■□□□□ 0.23
ZNF140P52738 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF140P52738 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ZNF140P52738 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF140P52738 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
ZNF140P52738 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF140P52738 AL355306.1-201ENST00000415580 579 ntBASIC16.46■□□□□ 0.23
ZNF140P52738 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.46■□□□□ 0.23
ZNF140P52738 AC093724.1-201ENST00000448659 1027 ntBASIC16.46■□□□□ 0.23
ZNF140P52738 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ZNF140P52738 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.46■□□□□ 0.23
ZNF140P52738 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF140P52738 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.46■□□□□ 0.23
ZNF140P52738 RARRES2P8-201ENST00000566335 367 ntBASIC16.46■□□□□ 0.23
ZNF140P52738 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF140P52738 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.46■□□□□ 0.23
ZNF140P52738 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.46■□□□□ 0.23
ZNF140P52738 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF140P52738 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.46■□□□□ 0.23
ZNF140P52738 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ZNF140P52738 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF140P52738 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ZNF140P52738 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ZNF140P52738 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
ZNF140P52738 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.46■□□□□ 0.23
ZNF140P52738 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.46■□□□□ 0.23
ZNF140P52738 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
ZNF140P52738 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.46■□□□□ 0.22
ZNF140P52738 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ZNF140P52738 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ZNF140P52738 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF140P52738 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
ZNF140P52738 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
ZNF140P52738 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ZNF140P52738 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
ZNF140P52738 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ZNF140P52738 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 YBX2P1-201ENST00000394192 760 ntBASIC16.45■□□□□ 0.22
ZNF140P52738 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF140P52738 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF140P52738 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ZNF140P52738 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.45■□□□□ 0.22
ZNF140P52738 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF140P52738 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
ZNF140P52738 AC073439.1-201ENST00000624121 1774 ntBASIC16.45■□□□□ 0.22
ZNF140P52738 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
ZNF140P52738 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ZNF140P52738 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms