Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL11A1P12107 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL11A1P12107 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.56■□□□□ 0.56
COL11A1P12107 ATP5G2P4-201ENST00000442175 420 ntBASIC18.56■□□□□ 0.56
COL11A1P12107 AC119751.2-201ENST00000504529 210 ntBASIC18.56■□□□□ 0.56
COL11A1P12107 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.56■□□□□ 0.56
COL11A1P12107 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL11A1P12107 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.56■□□□□ 0.56
COL11A1P12107 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL11A1P12107 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL11A1P12107 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL11A1P12107 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
COL11A1P12107 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL11A1P12107 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.56■□□□□ 0.56
COL11A1P12107 GK-202ENST00000378941 458 ntTSL 3 BASIC18.56■□□□□ 0.56
COL11A1P12107 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.56■□□□□ 0.56
COL11A1P12107 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.56■□□□□ 0.56
COL11A1P12107 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.56■□□□□ 0.56
COL11A1P12107 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL11A1P12107 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.55■□□□□ 0.56
COL11A1P12107 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.55■□□□□ 0.56
COL11A1P12107 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.55■□□□□ 0.56
COL11A1P12107 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL11A1P12107 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.55■□□□□ 0.56
COL11A1P12107 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL11A1P12107 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.55■□□□□ 0.56
COL11A1P12107 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.55■□□□□ 0.56
COL11A1P12107 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.55■□□□□ 0.56
COL11A1P12107 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 INE1-201ENST00000456273 945 ntBASIC18.55■□□□□ 0.56
COL11A1P12107 USP32P1-208ENST00000506594 1164 ntBASIC18.55■□□□□ 0.56
COL11A1P12107 DOC2GP-202ENST00000514950 1163 ntBASIC18.55■□□□□ 0.56
COL11A1P12107 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.55■□□□□ 0.56
COL11A1P12107 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.55■□□□□ 0.56
COL11A1P12107 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL11A1P12107 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COL11A1P12107 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.55■□□□□ 0.56
COL11A1P12107 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL11A1P12107 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.54■□□□□ 0.56
COL11A1P12107 HIST3H2BA-201ENST00000436555 524 ntBASIC18.54■□□□□ 0.56
COL11A1P12107 TTTY23B-201ENST00000442790 549 ntBASIC18.54■□□□□ 0.56
COL11A1P12107 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.54■□□□□ 0.56
COL11A1P12107 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COL11A1P12107 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COL11A1P12107 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
COL11A1P12107 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.54■□□□□ 0.56
COL11A1P12107 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.54■□□□□ 0.56
COL11A1P12107 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.54■□□□□ 0.56
COL11A1P12107 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.54■□□□□ 0.56
COL11A1P12107 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
COL11A1P12107 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.54■□□□□ 0.56
COL11A1P12107 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
COL11A1P12107 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL11A1P12107 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.53■□□□□ 0.56
COL11A1P12107 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL11A1P12107 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.53■□□□□ 0.56
COL11A1P12107 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL11A1P12107 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms