Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC9.31□□□□□ -0.92
Smim1P0C8K7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.3□□□□□ -0.92
Smim1P0C8K7 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.3□□□□□ -0.92
Smim1P0C8K7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Mir874-201ENSMUST00000104769 76 ntBASIC9.3□□□□□ -0.92
Smim1P0C8K7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Gm6345-202ENSMUST00000180900 204 ntBASIC9.3□□□□□ -0.92
Smim1P0C8K7 Gm8520-201ENSMUST00000186517 868 ntBASIC9.3□□□□□ -0.92
Smim1P0C8K7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Gm37153-201ENSMUST00000193637 231 ntBASIC9.3□□□□□ -0.92
Smim1P0C8K7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.3□□□□□ -0.92
Smim1P0C8K7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Smim1P0C8K7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC9.29□□□□□ -0.92
Smim1P0C8K7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Smim1P0C8K7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.29□□□□□ -0.92
Smim1P0C8K7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Gm13168-201ENSMUST00000121771 632 ntBASIC9.29□□□□□ -0.92
Smim1P0C8K7 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.29□□□□□ -0.92
Smim1P0C8K7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Arhgef33-211ENSMUST00000225658 473 ntBASIC9.29□□□□□ -0.92
Smim1P0C8K7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smim1P0C8K7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms