Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.47□□□□□ -0.09
SYNGR3O43761 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SYNGR3O43761 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SYNGR3O43761 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SYNGR3O43761 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.46□□□□□ -0.09
SYNGR3O43761 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SYNGR3O43761 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.46□□□□□ -0.09
SYNGR3O43761 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SYNGR3O43761 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SYNGR3O43761 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.46□□□□□ -0.09
SYNGR3O43761 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.46□□□□□ -0.09
SYNGR3O43761 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 MKNK2P1-201ENST00000437526 628 ntBASIC14.46□□□□□ -0.09
SYNGR3O43761 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.46□□□□□ -0.09
SYNGR3O43761 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.46□□□□□ -0.09
SYNGR3O43761 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SYNGR3O43761 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SYNGR3O43761 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
SYNGR3O43761 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.46□□□□□ -0.09
SYNGR3O43761 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.46□□□□□ -0.09
SYNGR3O43761 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.46□□□□□ -0.09
SYNGR3O43761 AC079781.4-201ENST00000641908 219 ntBASIC14.46□□□□□ -0.09
SYNGR3O43761 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 PCDH8P1-201ENST00000428983 2773 ntBASIC14.46□□□□□ -0.09
SYNGR3O43761 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
SYNGR3O43761 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SYNGR3O43761 MTHFR-217ENST00000641820 1569 ntBASIC14.46□□□□□ -0.09
SYNGR3O43761 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SYNGR3O43761 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.46□□□□□ -0.1
SYNGR3O43761 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SYNGR3O43761 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.46□□□□□ -0.1
SYNGR3O43761 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SYNGR3O43761 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SYNGR3O43761 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SYNGR3O43761 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
SYNGR3O43761 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
SYNGR3O43761 DOC2GP-204ENST00000639052 2548 ntBASIC14.46□□□□□ -0.1
SYNGR3O43761 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SYNGR3O43761 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
SYNGR3O43761 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SYNGR3O43761 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.46□□□□□ -0.1
SYNGR3O43761 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.46□□□□□ -0.1
SYNGR3O43761 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SYNGR3O43761 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SYNGR3O43761 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.46□□□□□ -0.1
SYNGR3O43761 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.45□□□□□ -0.1
SYNGR3O43761 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SYNGR3O43761 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SYNGR3O43761 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.45□□□□□ -0.1
SYNGR3O43761 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.45□□□□□ -0.1
SYNGR3O43761 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.45□□□□□ -0.1
SYNGR3O43761 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SYNGR3O43761 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.45□□□□□ -0.1
SYNGR3O43761 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
SYNGR3O43761 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.45□□□□□ -0.1
SYNGR3O43761 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SYNGR3O43761 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.45□□□□□ -0.1
SYNGR3O43761 POU5F1P6-201ENST00000466990 990 ntBASIC14.45□□□□□ -0.1
SYNGR3O43761 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.45□□□□□ -0.1
SYNGR3O43761 AC109635.5-201ENST00000533593 962 ntBASIC14.45□□□□□ -0.1
SYNGR3O43761 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
SYNGR3O43761 AC068137.2-201ENST00000605408 478 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms