Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 MIR1233-2-201ENST00000408138 82 ntBASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 MIR1233-1-201ENST00000408722 82 ntBASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 HTR5BP-201ENST00000430851 1154 ntBASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 ACTG1P14-201ENST00000446382 1122 ntBASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 AL009183.1-201ENST00000603760 355 ntBASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 AL031055.1-201ENST00000606362 631 ntBASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRDM9Q9NQV7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 LINC01144-201ENST00000626198 1710 ntBASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 ALG1L5P-201ENST00000482043 771 ntBASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 AL390728.6-201ENST00000566446 1246 ntBASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRDM9Q9NQV7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 GGT4P-201ENST00000623672 1708 ntBASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 AL031731.1-201ENST00000642131 2094 ntBASIC15.71■□□□□ 0.1
PRDM9Q9NQV7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 GPAA1P2-202ENST00000606848 1787 ntBASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 ME2P1-201ENST00000426028 1970 ntBASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRDM9Q9NQV7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms