Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CASKIN1Q8WXD9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CASKIN1Q8WXD9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CASKIN1Q8WXD9 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 PCDHB18P-201ENST00000524813 2368 ntBASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CASKIN1Q8WXD9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 RHOA-206ENST00000454011 889 ntTSL 2 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 POU5F1P6-201ENST00000466990 990 ntBASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 AL592424.1-201ENST00000563624 1536 ntBASIC25.4■■□□□ 1.66
CASKIN1Q8WXD9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 AC098614.1-201ENST00000368528 745 ntBASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC25.39■■□□□ 1.66
CASKIN1Q8WXD9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CASKIN1Q8WXD9 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 AC087499.6-201ENST00000411576 835 ntBASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CASKIN1Q8WXD9 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CASKIN1Q8WXD9 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC25.37■■□□□ 1.65
CASKIN1Q8WXD9 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CASKIN1Q8WXD9 AC079776.1-201ENST00000401540 1152 ntBASIC25.37■■□□□ 1.65
CASKIN1Q8WXD9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CASKIN1Q8WXD9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC25.37■■□□□ 1.65
CASKIN1Q8WXD9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
CASKIN1Q8WXD9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms