Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AC104794.3-201ENST00000566840 1248 ntBASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 AL671710.1-201ENST00000610245 2349 ntBASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAI1Q7Z5J4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 AC020916.1-201ENST00000587762 1774 ntBASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 AL079307.3-201ENST00000556114 283 ntBASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 RN7SL828P-201ENST00000607615 303 ntBASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 FLJ38576-201ENST00000623820 2459 ntBASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.04□□□□□ -0.16
RAI1Q7Z5J4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 RPL37AP1-201ENST00000412502 279 ntBASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC061975.2-201ENST00000581722 295 ntBASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC004233.3-201ENST00000607794 1269 ntBASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC087499.5-201ENST00000452760 1342 ntBASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AL035456.1-201ENST00000456064 1369 ntBASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 AC009407.1-201ENST00000568958 598 ntBASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RAI1Q7Z5J4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms