Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC092933.1-201ENST00000393644 945 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 MEP1AP4-201ENST00000423244 1087 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC104989.1-201ENST00000519711 778 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AP000812.2-201ENST00000538934 718 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC244093.1-201ENST00000610837 814 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 KRT8P22-201ENST00000562317 1415 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC233724.13-201ENST00000598383 410 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AL022328.1-201ENST00000610050 478 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC091271.1-201ENST00000611877 1162 ntBASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
VPS13DQ5THJ4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 FAM86LP-201ENST00000478302 853 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 FAM86HP-204ENST00000513466 959 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC074338.1-201ENST00000416825 156 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 RN7SL399P-201ENST00000471648 279 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 RRP7BP-205ENST00000566851 833 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC036164.1-201ENST00000570544 333 ntBASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.94□□□□□ -0.66
VPS13DQ5THJ4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms