Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CNN2P2-201ENST00000443536 909 ntBASIC16.39■□□□□ 0.21
SRP54P61011 CNN2P3-201ENST00000450201 906 ntBASIC16.39■□□□□ 0.21
SRP54P61011 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.39■□□□□ 0.21
SRP54P61011 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.39■□□□□ 0.21
SRP54P61011 KRT18P34-201ENST00000488218 1270 ntBASIC16.39■□□□□ 0.21
SRP54P61011 AC067863.1-201ENST00000494933 530 ntBASIC16.39■□□□□ 0.21
SRP54P61011 SLC25A39P2-201ENST00000537614 270 ntBASIC16.39■□□□□ 0.21
SRP54P61011 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.39■□□□□ 0.21
SRP54P61011 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.39■□□□□ 0.21
SRP54P61011 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.39■□□□□ 0.21
SRP54P61011 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.39■□□□□ 0.21
SRP54P61011 AL136317.3-201ENST00000618497 906 ntBASIC16.39■□□□□ 0.21
SRP54P61011 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.39■□□□□ 0.21
SRP54P61011 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
SRP54P61011 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.39■□□□□ 0.21
SRP54P61011 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRP54P61011 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SRP54P61011 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.38■□□□□ 0.21
SRP54P61011 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.38■□□□□ 0.21
SRP54P61011 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SRP54P61011 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SRP54P61011 AP000842.3-202ENST00000569238 1080 ntBASIC16.38■□□□□ 0.21
SRP54P61011 AC015911.4-201ENST00000588022 1070 ntBASIC16.38■□□□□ 0.21
SRP54P61011 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.38■□□□□ 0.21
SRP54P61011 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.38■□□□□ 0.21
SRP54P61011 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SRP54P61011 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SRP54P61011 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SRP54P61011 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SRP54P61011 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SRP54P61011 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
SRP54P61011 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SRP54P61011 PCDHB17P-201ENST00000539533 2393 ntBASIC16.37■□□□□ 0.21
SRP54P61011 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.37■□□□□ 0.21
SRP54P61011 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SRP54P61011 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SRP54P61011 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.37■□□□□ 0.21
SRP54P61011 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SRP54P61011 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.37■□□□□ 0.21
SRP54P61011 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 MIR346-201ENST00000362234 95 ntBASIC16.37■□□□□ 0.21
SRP54P61011 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.37■□□□□ 0.21
SRP54P61011 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.37■□□□□ 0.21
SRP54P61011 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 AC069262.1-201ENST00000539058 672 ntBASIC16.37■□□□□ 0.21
SRP54P61011 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.37■□□□□ 0.21
SRP54P61011 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.37■□□□□ 0.21
SRP54P61011 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.37■□□□□ 0.21
SRP54P61011 AC026150.2-201ENST00000564693 1156 ntBASIC16.37■□□□□ 0.21
SRP54P61011 AL138918.1-201ENST00000568306 659 ntBASIC16.37■□□□□ 0.21
SRP54P61011 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms