Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.41■□□□□ 0.22
VARSP26640 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
VARSP26640 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARSP26640 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARSP26640 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARSP26640 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VARSP26640 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.4■□□□□ 0.22
VARSP26640 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
VARSP26640 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.4■□□□□ 0.22
VARSP26640 PI4KAP1-204ENST00000612579 1703 ntBASIC16.4■□□□□ 0.22
VARSP26640 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.4■□□□□ 0.22
VARSP26640 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.4■□□□□ 0.22
VARSP26640 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.4■□□□□ 0.22
VARSP26640 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 AC098831.1-202ENST00000438821 336 ntBASIC16.4■□□□□ 0.22
VARSP26640 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.4■□□□□ 0.22
VARSP26640 AL049840.3-201ENST00000602669 611 ntBASIC16.4■□□□□ 0.22
VARSP26640 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.4■□□□□ 0.22
VARSP26640 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
VARSP26640 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 AP002414.3-201ENST00000589352 1468 ntBASIC16.4■□□□□ 0.22
VARSP26640 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VARSP26640 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VARSP26640 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
VARSP26640 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VARSP26640 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.39■□□□□ 0.21
VARSP26640 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VARSP26640 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VARSP26640 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.39■□□□□ 0.21
VARSP26640 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.39■□□□□ 0.21
VARSP26640 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.39■□□□□ 0.21
VARSP26640 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 PAWRP1-201ENST00000451083 565 ntBASIC16.39■□□□□ 0.21
VARSP26640 IGHV3-22-201ENST00000520721 359 ntBASIC16.39■□□□□ 0.21
VARSP26640 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.39■□□□□ 0.21
VARSP26640 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.39■□□□□ 0.21
VARSP26640 AC008735.5-201ENST00000623544 497 ntBASIC16.39■□□□□ 0.21
VARSP26640 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VARSP26640 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 AC132872.4-202ENST00000622924 2756 ntBASIC16.39■□□□□ 0.21
VARSP26640 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.39■□□□□ 0.21
VARSP26640 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 AC006449.5-201ENST00000610658 2098 ntBASIC16.39■□□□□ 0.21
VARSP26640 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
VARSP26640 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VARSP26640 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VARSP26640 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
VARSP26640 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
VARSP26640 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VARSP26640 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms