Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COL2A1P02458 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.13■□□□□ 0.65
COL2A1P02458 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL2A1P02458 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.12■□□□□ 0.65
COL2A1P02458 AL592424.1-201ENST00000563624 1536 ntBASIC19.12■□□□□ 0.65
COL2A1P02458 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
COL2A1P02458 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL2A1P02458 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.12■□□□□ 0.65
COL2A1P02458 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
COL2A1P02458 DGCR5-201ENST00000399539 862 ntBASIC19.12■□□□□ 0.65
COL2A1P02458 AP006294.1-201ENST00000415407 339 ntBASIC19.12■□□□□ 0.65
COL2A1P02458 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL2A1P02458 KRT17P7-201ENST00000451704 1104 ntBASIC19.12■□□□□ 0.65
COL2A1P02458 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.12■□□□□ 0.65
COL2A1P02458 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.12■□□□□ 0.65
COL2A1P02458 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.12■□□□□ 0.65
COL2A1P02458 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.12■□□□□ 0.65
COL2A1P02458 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.12■□□□□ 0.65
COL2A1P02458 AL359881.2-201ENST00000602973 570 ntBASIC19.12■□□□□ 0.65
COL2A1P02458 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL2A1P02458 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL2A1P02458 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL2A1P02458 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COL2A1P02458 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL2A1P02458 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
COL2A1P02458 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.12■□□□□ 0.65
COL2A1P02458 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL2A1P02458 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
COL2A1P02458 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL2A1P02458 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.11■□□□□ 0.65
COL2A1P02458 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.11■□□□□ 0.65
COL2A1P02458 MEP1AP4-201ENST00000423244 1087 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.11■□□□□ 0.65
COL2A1P02458 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.11■□□□□ 0.65
COL2A1P02458 AC023310.3-201ENST00000557027 670 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 AC100756.1-201ENST00000562736 682 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 AC138749.3-201ENST00000567691 622 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 CHCHD2P3-201ENST00000603038 451 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 AC008494.3-201ENST00000606615 944 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 AL391069.4-201ENST00000609583 481 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 AC116165.1-201ENST00000611806 668 ntBASIC19.11■□□□□ 0.65
COL2A1P02458 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
COL2A1P02458 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.11■□□□□ 0.65
COL2A1P02458 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.11■□□□□ 0.65
COL2A1P02458 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.11■□□□□ 0.65
COL2A1P02458 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL2A1P02458 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.11■□□□□ 0.65
COL2A1P02458 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.1■□□□□ 0.65
COL2A1P02458 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.1■□□□□ 0.65
COL2A1P02458 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.1■□□□□ 0.65
COL2A1P02458 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.1■□□□□ 0.65
COL2A1P02458 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.1■□□□□ 0.65
COL2A1P02458 AL589987.1-201ENST00000453380 819 ntBASIC19.1■□□□□ 0.65
COL2A1P02458 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
COL2A1P02458 TPRX2P-201ENST00000535362 881 ntBASIC19.1■□□□□ 0.65
COL2A1P02458 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.1■□□□□ 0.65
COL2A1P02458 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
COL2A1P02458 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.1■□□□□ 0.65
COL2A1P02458 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
COL2A1P02458 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.1■□□□□ 0.65
COL2A1P02458 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.1■□□□□ 0.65
COL2A1P02458 Z97205.2-201ENST00000564697 1639 ntBASIC19.1■□□□□ 0.65
COL2A1P02458 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL2A1P02458 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
COL2A1P02458 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COL2A1P02458 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.09■□□□□ 0.65
COL2A1P02458 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
COL2A1P02458 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.09■□□□□ 0.65
COL2A1P02458 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.09■□□□□ 0.65
COL2A1P02458 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
COL2A1P02458 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.09■□□□□ 0.65
COL2A1P02458 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COL2A1P02458 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.09■□□□□ 0.65
COL2A1P02458 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL2A1P02458 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms