Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCNKO75909 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
CCNKO75909 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCNKO75909 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCNKO75909 LINC00552-201ENST00000625151 2579 ntBASIC14.46□□□□□ -0.09
CCNKO75909 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCNKO75909 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCNKO75909 AC232323.1-201ENST00000540724 2099 ntBASIC14.46□□□□□ -0.09
CCNKO75909 REXO1L5P-201ENST00000622260 2098 ntBASIC14.46□□□□□ -0.09
CCNKO75909 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CCNKO75909 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCNKO75909 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.46□□□□□ -0.1
CCNKO75909 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.46□□□□□ -0.1
CCNKO75909 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.46□□□□□ -0.1
CCNKO75909 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCNKO75909 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCNKO75909 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCNKO75909 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CCNKO75909 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.45□□□□□ -0.1
CCNKO75909 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.45□□□□□ -0.1
CCNKO75909 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.45□□□□□ -0.1
CCNKO75909 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.45□□□□□ -0.1
CCNKO75909 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.45□□□□□ -0.1
CCNKO75909 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCNKO75909 KSR1P1-201ENST00000446298 240 ntBASIC14.45□□□□□ -0.1
CCNKO75909 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
CCNKO75909 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.45□□□□□ -0.1
CCNKO75909 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCNKO75909 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.45□□□□□ -0.1
CCNKO75909 AC009065.1-201ENST00000564055 1225 ntBASIC14.45□□□□□ -0.1
CCNKO75909 AC142086.2-201ENST00000569753 217 ntBASIC14.45□□□□□ -0.1
CCNKO75909 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 AC130371.2-201ENST00000619443 611 ntBASIC14.45□□□□□ -0.1
CCNKO75909 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.45□□□□□ -0.1
CCNKO75909 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCNKO75909 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.45□□□□□ -0.1
CCNKO75909 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCNKO75909 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.45□□□□□ -0.1
CCNKO75909 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
CCNKO75909 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CCNKO75909 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCNKO75909 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.44□□□□□ -0.1
CCNKO75909 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CCNKO75909 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.44□□□□□ -0.1
CCNKO75909 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCNKO75909 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCNKO75909 KRT16P1-201ENST00000399124 1418 ntBASIC14.44□□□□□ -0.1
CCNKO75909 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.44□□□□□ -0.1
CCNKO75909 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.44□□□□□ -0.1
CCNKO75909 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.44□□□□□ -0.1
CCNKO75909 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.44□□□□□ -0.1
CCNKO75909 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.44□□□□□ -0.1
CCNKO75909 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.44□□□□□ -0.1
CCNKO75909 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 AL353708.3-201ENST00000610272 989 ntBASIC14.44□□□□□ -0.1
CCNKO75909 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCNKO75909 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCNKO75909 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms