Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 HTR5BP-201ENST00000430851 1154 ntBASIC15.31■□□□□ 0.04
TO15178 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TO15178 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.31■□□□□ 0.04
TO15178 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.31■□□□□ 0.04
TO15178 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.31■□□□□ 0.04
TO15178 FAM86C2P-203ENST00000528684 1004 ntBASIC15.31■□□□□ 0.04
TO15178 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.31■□□□□ 0.04
TO15178 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.31■□□□□ 0.04
TO15178 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.31■□□□□ 0.04
TO15178 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 AL078644.1-201ENST00000609881 752 ntBASIC15.31■□□□□ 0.04
TO15178 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TO15178 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.31■□□□□ 0.04
TO15178 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.31■□□□□ 0.04
TO15178 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TO15178 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.31■□□□□ 0.04
TO15178 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.31■□□□□ 0.04
TO15178 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.3■□□□□ 0.04
TO15178 GPX1P2-201ENST00000429271 606 ntBASIC15.3■□□□□ 0.04
TO15178 ADH5P3-201ENST00000433842 1137 ntBASIC15.3■□□□□ 0.04
TO15178 AKAP8P1-201ENST00000434743 1349 ntBASIC15.3■□□□□ 0.04
TO15178 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.3■□□□□ 0.04
TO15178 KRT18P34-201ENST00000488218 1270 ntBASIC15.3■□□□□ 0.04
TO15178 YBX1P5-201ENST00000509441 847 ntBASIC15.3■□□□□ 0.04
TO15178 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.3■□□□□ 0.04
TO15178 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.3■□□□□ 0.04
TO15178 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 RARRES2P8-201ENST00000566335 367 ntBASIC15.3■□□□□ 0.04
TO15178 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.3■□□□□ 0.04
TO15178 AC005829.1-201ENST00000570002 483 ntBASIC15.3■□□□□ 0.04
TO15178 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TO15178 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.3■□□□□ 0.04
TO15178 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
TO15178 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.3■□□□□ 0.04
TO15178 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.3■□□□□ 0.04
TO15178 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TO15178 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.3■□□□□ 0.04
TO15178 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TO15178 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TO15178 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TO15178 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.29■□□□□ 0.04
TO15178 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.29■□□□□ 0.04
TO15178 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.29■□□□□ 0.04
TO15178 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 LINC01144-201ENST00000626198 1710 ntBASIC15.29■□□□□ 0.04
TO15178 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TO15178 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 RPSAP43-201ENST00000402237 625 ntBASIC15.29■□□□□ 0.04
TO15178 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.29■□□□□ 0.04
TO15178 AL355306.1-201ENST00000415580 579 ntBASIC15.29■□□□□ 0.04
TO15178 UPF3AP3-201ENST00000420996 769 ntBASIC15.29■□□□□ 0.04
TO15178 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.29■□□□□ 0.04
TO15178 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TO15178 MIR3687-2-201ENST00000577708 61 ntBASIC15.29■□□□□ 0.04
TO15178 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms