Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCN11AQ9UI33 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 RRP7BP-205ENST00000566851 833 ntBASIC21.02■□□□□ 0.96
SCN11AQ9UI33 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 RNF216P1-203ENST00000404404 2427 ntBASIC21.02■□□□□ 0.96
SCN11AQ9UI33 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 MIR1909-201ENST00000411312 80 ntBASIC21.02■□□□□ 0.96
SCN11AQ9UI33 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 AC119751.2-201ENST00000504529 210 ntBASIC21.02■□□□□ 0.96
SCN11AQ9UI33 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 MIR6069-201ENST00000620069 79 ntBASIC21.02■□□□□ 0.96
SCN11AQ9UI33 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC21.02■□□□□ 0.96
SCN11AQ9UI33 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCN11AQ9UI33 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
SCN11AQ9UI33 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.02■□□□□ 0.95
SCN11AQ9UI33 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCN11AQ9UI33 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCN11AQ9UI33 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
SCN11AQ9UI33 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 AC005622.1-201ENST00000636801 1703 ntBASIC21.01■□□□□ 0.95
SCN11AQ9UI33 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 Z97205.2-201ENST00000564697 1639 ntBASIC21.01■□□□□ 0.95
SCN11AQ9UI33 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 AL512384.1-201ENST00000406683 331 ntBASIC21.01■□□□□ 0.95
SCN11AQ9UI33 ELK1P1-201ENST00000485699 580 ntBASIC21.01■□□□□ 0.95
SCN11AQ9UI33 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.01■□□□□ 0.95
SCN11AQ9UI33 PCDHB18P-201ENST00000524813 2368 ntBASIC21■□□□□ 0.95
SCN11AQ9UI33 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21■□□□□ 0.95
SCN11AQ9UI33 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21■□□□□ 0.95
SCN11AQ9UI33 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21■□□□□ 0.95
SCN11AQ9UI33 USP32P1-208ENST00000506594 1164 ntBASIC21■□□□□ 0.95
SCN11AQ9UI33 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21■□□□□ 0.95
SCN11AQ9UI33 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 AC008735.3-201ENST00000596646 500 ntBASIC21■□□□□ 0.95
SCN11AQ9UI33 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21■□□□□ 0.95
SCN11AQ9UI33 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SCN11AQ9UI33 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC21■□□□□ 0.95
SCN11AQ9UI33 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SCN11AQ9UI33 AL592424.1-201ENST00000563624 1536 ntBASIC21■□□□□ 0.95
SCN11AQ9UI33 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21■□□□□ 0.95
SCN11AQ9UI33 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21■□□□□ 0.95
SCN11AQ9UI33 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC21■□□□□ 0.95
SCN11AQ9UI33 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21■□□□□ 0.95
SCN11AQ9UI33 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21■□□□□ 0.95
SCN11AQ9UI33 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCN11AQ9UI33 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21■□□□□ 0.95
SCN11AQ9UI33 GPR53P-205ENST00000457298 1084 ntBASIC21■□□□□ 0.95
SCN11AQ9UI33 AC123567.1-201ENST00000548294 1261 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms