Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CCDC33Q8N5R6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 ACTG1P14-201ENST00000446382 1122 ntBASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 AL513480.1-201ENST00000451731 511 ntBASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 AC092919.2-201ENST00000623631 1645 ntBASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC33Q8N5R6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 AL139400.1-201ENST00000366220 510 ntBASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 AP000344.2-201ENST00000512987 629 ntBASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 AC068137.2-201ENST00000605408 478 ntBASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 AL139384.1-201ENST00000612143 3047 ntBASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC33Q8N5R6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC33Q8N5R6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC33Q8N5R6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC33Q8N5R6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.46■□□□□ 0.38
CCDC33Q8N5R6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC33Q8N5R6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
CCDC33Q8N5R6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms