Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 AC243562.1-201ENST00000560672 389 ntBASIC15.46■□□□□ 0.07
BEST3Q8N1M1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.46■□□□□ 0.07
BEST3Q8N1M1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
BEST3Q8N1M1 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.46■□□□□ 0.06
BEST3Q8N1M1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
BEST3Q8N1M1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.46■□□□□ 0.06
BEST3Q8N1M1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AC092474.2-201ENST00000424288 719 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 HLA-J-203ENST00000494367 1087 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AC109322.1-201ENST00000524499 1264 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 LINC00628-201ENST00000628516 1289 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AL023806.1-201ENST00000603994 1649 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 AC046158.3-201ENST00000624947 2558 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.45■□□□□ 0.06
BEST3Q8N1M1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.45■□□□□ 0.06
BEST3Q8N1M1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
BEST3Q8N1M1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms