Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.84□□□□□ -0.03
Depdc1bQ8BH88 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Depdc1bQ8BH88 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Depdc1bQ8BH88 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Depdc1bQ8BH88 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Depdc1bQ8BH88 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Depdc1bQ8BH88 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Depdc1bQ8BH88 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Depdc1bQ8BH88 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Gm15460-201ENSMUST00000118147 391 ntBASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Depdc1bQ8BH88 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Gm9794-201ENSMUST00000202370 423 ntBASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Depdc1bQ8BH88 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms