Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.34■□□□□ 0.53
SMPD1P17405 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.34■□□□□ 0.53
SMPD1P17405 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SMPD1P17405 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.34■□□□□ 0.53
SMPD1P17405 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.34■□□□□ 0.53
SMPD1P17405 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.34■□□□□ 0.53
SMPD1P17405 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.34■□□□□ 0.53
SMPD1P17405 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SMPD1P17405 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 SPDYE17-201ENST00000412399 783 ntBASIC18.34■□□□□ 0.53
SMPD1P17405 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SMPD1P17405 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.34■□□□□ 0.53
SMPD1P17405 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.34■□□□□ 0.53
SMPD1P17405 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.34■□□□□ 0.53
SMPD1P17405 AL359881.2-201ENST00000602973 570 ntBASIC18.34■□□□□ 0.53
SMPD1P17405 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.34■□□□□ 0.53
SMPD1P17405 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SMPD1P17405 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.34■□□□□ 0.53
SMPD1P17405 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.34■□□□□ 0.53
SMPD1P17405 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SMPD1P17405 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SMPD1P17405 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMPD1P17405 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.33■□□□□ 0.53
SMPD1P17405 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMPD1P17405 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.33■□□□□ 0.53
SMPD1P17405 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMPD1P17405 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.33■□□□□ 0.53
SMPD1P17405 HTR7P1-202ENST00000624664 4411 ntBASIC18.33■□□□□ 0.53
SMPD1P17405 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMPD1P17405 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.33■□□□□ 0.53
SMPD1P17405 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
SMPD1P17405 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMPD1P17405 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SMPD1P17405 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
SMPD1P17405 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMPD1P17405 GGT4P-201ENST00000623672 1708 ntBASIC18.33■□□□□ 0.52
SMPD1P17405 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMPD1P17405 AC098614.1-201ENST00000368528 745 ntBASIC18.33■□□□□ 0.52
SMPD1P17405 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SMPD1P17405 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.33■□□□□ 0.52
SMPD1P17405 AC114501.2-201ENST00000439631 535 ntBASIC18.33■□□□□ 0.52
SMPD1P17405 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.33■□□□□ 0.52
SMPD1P17405 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SMPD1P17405 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.33■□□□□ 0.52
SMPD1P17405 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMPD1P17405 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.33■□□□□ 0.52
SMPD1P17405 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.33■□□□□ 0.52
SMPD1P17405 AL033527.5-202ENST00000641632 1098 ntBASIC18.33■□□□□ 0.52
SMPD1P17405 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMPD1P17405 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.33■□□□□ 0.52
SMPD1P17405 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SMPD1P17405 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SMPD1P17405 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.33■□□□□ 0.52
SMPD1P17405 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.33■□□□□ 0.52
SMPD1P17405 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SMPD1P17405 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.32■□□□□ 0.52
SMPD1P17405 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.32■□□□□ 0.52
SMPD1P17405 AC139713.2-201ENST00000641328 2723 ntBASIC18.32■□□□□ 0.52
SMPD1P17405 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.32■□□□□ 0.52
SMPD1P17405 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SMPD1P17405 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 ARSEP1-201ENST00000420443 635 ntBASIC18.32■□□□□ 0.52
SMPD1P17405 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
SMPD1P17405 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.32■□□□□ 0.52
SMPD1P17405 WASH4P-201ENST00000564273 1246 ntBASIC18.32■□□□□ 0.52
SMPD1P17405 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.32■□□□□ 0.52
SMPD1P17405 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SMPD1P17405 IGHV3-72-202ENST00000621503 303 ntBASIC18.32■□□□□ 0.52
SMPD1P17405 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.32■□□□□ 0.52
SMPD1P17405 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SMPD1P17405 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.32■□□□□ 0.52
SMPD1P17405 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.32■□□□□ 0.52
SMPD1P17405 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms