Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTCD2Q8WV60 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 AC131009.4-201ENST00000624048 1740 ntBASIC16.91■□□□□ 0.3
PTCD2Q8WV60 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 CYP2T1P-202ENST00000641596 2535 ntBASIC16.91■□□□□ 0.3
PTCD2Q8WV60 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 KRT18P13-201ENST00000400056 1290 ntBASIC16.91■□□□□ 0.3
PTCD2Q8WV60 MRPL20P1-201ENST00000400819 433 ntBASIC16.91■□□□□ 0.3
PTCD2Q8WV60 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 AC005412.3-201ENST00000580309 715 ntBASIC16.91■□□□□ 0.3
PTCD2Q8WV60 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 SNX33P1-201ENST00000592116 1762 ntBASIC16.91■□□□□ 0.3
PTCD2Q8WV60 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTCD2Q8WV60 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 KRT8P39-201ENST00000396270 1433 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 ME2P1-201ENST00000426028 1970 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 YBX2P1-201ENST00000394192 760 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 PRSS29P-201ENST00000440800 595 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 AC107918.2-201ENST00000530817 355 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 AC010327.4-202ENST00000591484 748 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 AC010507.1-201ENST00000633895 436 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 AC006449.5-201ENST00000610658 2098 ntBASIC16.9■□□□□ 0.3
PTCD2Q8WV60 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTCD2Q8WV60 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.89■□□□□ 0.3
PTCD2Q8WV60 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.89■□□□□ 0.3
PTCD2Q8WV60 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PTCD2Q8WV60 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.89■□□□□ 0.3
PTCD2Q8WV60 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.89■□□□□ 0.3
PTCD2Q8WV60 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 UBALD1-205ENST00000590891 2641 ntBASIC16.89■□□□□ 0.29
PTCD2Q8WV60 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC040169.1-201ENST00000565382 521 ntBASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC121493.1-201ENST00000602316 450 ntBASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC010654.1-201ENST00000615722 808 ntBASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC139530.3-201ENST00000620344 690 ntBASIC16.89■□□□□ 0.29
PTCD2Q8WV60 AC055717.3-201ENST00000622967 595 ntBASIC16.89■□□□□ 0.29
PTCD2Q8WV60 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms