Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.79□□□□□ -0.52
PRKDCP78527 AC104982.3-201ENST00000581995 514 ntBASIC11.79□□□□□ -0.52
PRKDCP78527 AC005357.2-202ENST00000590507 1060 ntBASIC11.79□□□□□ -0.52
PRKDCP78527 LINC01115-203ENST00000606068 577 ntBASIC11.79□□□□□ -0.52
PRKDCP78527 AC021097.1-201ENST00000607902 574 ntBASIC11.79□□□□□ -0.52
PRKDCP78527 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PRKDCP78527 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PRKDCP78527 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
PRKDCP78527 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PRKDCP78527 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.79□□□□□ -0.52
PRKDCP78527 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
PRKDCP78527 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PRKDCP78527 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC11.79□□□□□ -0.52
PRKDCP78527 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.79□□□□□ -0.52
PRKDCP78527 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.79□□□□□ -0.52
PRKDCP78527 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
PRKDCP78527 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
PRKDCP78527 AC073352.2-201ENST00000609385 439 ntBASIC11.79□□□□□ -0.52
PRKDCP78527 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
PRKDCP78527 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PRKDCP78527 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.78□□□□□ -0.52
PRKDCP78527 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
PRKDCP78527 AC134698.3-201ENST00000523880 214 ntBASIC11.78□□□□□ -0.52
PRKDCP78527 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC11.78□□□□□ -0.52
PRKDCP78527 MIR4750-201ENST00000584564 56 ntBASIC11.78□□□□□ -0.52
PRKDCP78527 AC005252.2-201ENST00000624630 1141 ntBASIC11.78□□□□□ -0.52
PRKDCP78527 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
PRKDCP78527 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC11.78□□□□□ -0.52
PRKDCP78527 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC11.78□□□□□ -0.52
PRKDCP78527 SERF2-206ENST00000409291 807 ntTSL 3 BASIC11.78□□□□□ -0.52
PRKDCP78527 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.78□□□□□ -0.52
PRKDCP78527 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC11.78□□□□□ -0.52
PRKDCP78527 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.78□□□□□ -0.52
PRKDCP78527 AL049840.4-201ENST00000602422 811 ntBASIC11.78□□□□□ -0.52
PRKDCP78527 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 AC011491.1-203ENST00000637688 543 ntBASIC11.78□□□□□ -0.52
PRKDCP78527 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.78□□□□□ -0.52
PRKDCP78527 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC11.78□□□□□ -0.52
PRKDCP78527 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 BRI3BPP1-201ENST00000594224 787 ntBASIC11.78□□□□□ -0.52
PRKDCP78527 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 INTS4P2-202ENST00000614726 2019 ntBASIC11.78□□□□□ -0.52
PRKDCP78527 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
PRKDCP78527 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.78□□□□□ -0.52
PRKDCP78527 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.78□□□□□ -0.52
PRKDCP78527 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.77□□□□□ -0.52
PRKDCP78527 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PRKDCP78527 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC11.77□□□□□ -0.52
PRKDCP78527 AC012441.1-201ENST00000446669 685 ntBASIC11.77□□□□□ -0.52
PRKDCP78527 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.77□□□□□ -0.52
PRKDCP78527 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC11.77□□□□□ -0.52
PRKDCP78527 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.77□□□□□ -0.52
PRKDCP78527 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
PRKDCP78527 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
PRKDCP78527 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.77□□□□□ -0.52
PRKDCP78527 CDK7-214ENST00000626796 358 ntTSL 5 BASIC11.77□□□□□ -0.52
PRKDCP78527 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC11.77□□□□□ -0.52
PRKDCP78527 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PRKDCP78527 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
PRKDCP78527 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PRKDCP78527 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC11.77□□□□□ -0.52
PRKDCP78527 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
PRKDCP78527 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PRKDCP78527 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11.77□□□□□ -0.53
PRKDCP78527 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
PRKDCP78527 CYP46A4P-201ENST00000414953 267 ntBASIC11.77□□□□□ -0.53
PRKDCP78527 PARVG-202ENST00000415224 999 ntTSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
PRKDCP78527 AC245884.6-201ENST00000515672 1067 ntBASIC11.77□□□□□ -0.53
PRKDCP78527 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC11.77□□□□□ -0.53
PRKDCP78527 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
PRKDCP78527 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
PRKDCP78527 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 FOS-208ENST00000555686 1496 ntTSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
PRKDCP78527 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms