Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDK7P50613 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK7P50613 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK7P50613 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDK7P50613 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDK7P50613 AL080243.2-201ENST00000418783 582 ntBASIC18.32■□□□□ 0.52
CDK7P50613 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.32■□□□□ 0.52
CDK7P50613 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.32■□□□□ 0.52
CDK7P50613 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK7P50613 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK7P50613 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK7P50613 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK7P50613 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDK7P50613 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK7P50613 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDK7P50613 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK7P50613 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK7P50613 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK7P50613 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK7P50613 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CDK7P50613 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK7P50613 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.31■□□□□ 0.52
CDK7P50613 CHCHD2P3-201ENST00000603038 451 ntBASIC18.31■□□□□ 0.52
CDK7P50613 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CDK7P50613 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK7P50613 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK7P50613 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK7P50613 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDK7P50613 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK7P50613 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDK7P50613 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CDK7P50613 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK7P50613 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.3■□□□□ 0.52
CDK7P50613 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 AL512384.1-201ENST00000406683 331 ntBASIC18.3■□□□□ 0.52
CDK7P50613 AC087499.6-201ENST00000411576 835 ntBASIC18.3■□□□□ 0.52
CDK7P50613 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK7P50613 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK7P50613 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 AC132938.2-201ENST00000579188 680 ntBASIC18.3■□□□□ 0.52
CDK7P50613 AC004790.1-201ENST00000612686 536 ntBASIC18.3■□□□□ 0.52
CDK7P50613 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDK7P50613 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK7P50613 AL591163.1-201ENST00000641757 987 ntBASIC18.3■□□□□ 0.52
CDK7P50613 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDK7P50613 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK7P50613 AC108860.2-201ENST00000562760 2183 ntBASIC18.3■□□□□ 0.52
CDK7P50613 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.29■□□□□ 0.52
CDK7P50613 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDK7P50613 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms