Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 MRPL20P1-201ENST00000400819 433 ntBASIC17.22■□□□□ 0.35
PTPN7P35236 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 KRT18P67-201ENST00000432816 1264 ntBASIC17.22■□□□□ 0.35
PTPN7P35236 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.22■□□□□ 0.35
PTPN7P35236 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.22■□□□□ 0.35
PTPN7P35236 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PTPN7P35236 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.22■□□□□ 0.35
PTPN7P35236 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTPN7P35236 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PTPN7P35236 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 AP002414.3-201ENST00000589352 1468 ntBASIC17.21■□□□□ 0.35
PTPN7P35236 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN7P35236 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN7P35236 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.21■□□□□ 0.35
PTPN7P35236 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 AC012640.2-201ENST00000561606 901 ntBASIC17.21■□□□□ 0.35
PTPN7P35236 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PTPN7P35236 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 ACTL9-202ENST00000612068 1252 ntBASIC17.21■□□□□ 0.35
PTPN7P35236 AC005593.1-201ENST00000624894 515 ntBASIC17.21■□□□□ 0.35
PTPN7P35236 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.21■□□□□ 0.35
PTPN7P35236 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PTPN7P35236 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTPN7P35236 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.21■□□□□ 0.35
PTPN7P35236 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN7P35236 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.21■□□□□ 0.34
PTPN7P35236 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.21■□□□□ 0.34
PTPN7P35236 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN7P35236 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN7P35236 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN7P35236 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN7P35236 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTPN7P35236 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN7P35236 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTPN7P35236 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN7P35236 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPN7P35236 FAM185BP-201ENST00000443595 716 ntBASIC17.2■□□□□ 0.34
PTPN7P35236 FAM197Y8-203ENST00000450145 560 ntBASIC17.2■□□□□ 0.34
PTPN7P35236 AC108073.2-201ENST00000464002 357 ntBASIC17.2■□□□□ 0.34
PTPN7P35236 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.2■□□□□ 0.34
PTPN7P35236 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PTPN7P35236 MIR3909-201ENST00000579518 119 ntBASIC17.2■□□□□ 0.34
PTPN7P35236 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms