Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.66■□□□□ 0.58
COL11A1P12107 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL11A1P12107 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL11A1P12107 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.65■□□□□ 0.58
COL11A1P12107 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
COL11A1P12107 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 AP006294.1-201ENST00000415407 339 ntBASIC18.65■□□□□ 0.58
COL11A1P12107 GNAQP1-201ENST00000444815 1067 ntBASIC18.65■□□□□ 0.58
COL11A1P12107 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 AC055876.2-201ENST00000531834 546 ntBASIC18.65■□□□□ 0.58
COL11A1P12107 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.65■□□□□ 0.58
COL11A1P12107 HILS1-202ENST00000545329 423 ntBASIC18.65■□□□□ 0.58
COL11A1P12107 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.65■□□□□ 0.58
COL11A1P12107 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.65■□□□□ 0.58
COL11A1P12107 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.65■□□□□ 0.58
COL11A1P12107 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.65■□□□□ 0.58
COL11A1P12107 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
COL11A1P12107 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
COL11A1P12107 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.65■□□□□ 0.58
COL11A1P12107 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.65■□□□□ 0.58
COL11A1P12107 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.65■□□□□ 0.58
COL11A1P12107 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.65■□□□□ 0.58
COL11A1P12107 AC092337.1-201ENST00000568699 1129 ntBASIC18.65■□□□□ 0.58
COL11A1P12107 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.65■□□□□ 0.58
COL11A1P12107 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 AL033527.5-202ENST00000641632 1098 ntBASIC18.65■□□□□ 0.58
COL11A1P12107 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL11A1P12107 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.64■□□□□ 0.58
COL11A1P12107 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
COL11A1P12107 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.64■□□□□ 0.58
COL11A1P12107 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL11A1P12107 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.64■□□□□ 0.58
COL11A1P12107 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL11A1P12107 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL11A1P12107 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.64■□□□□ 0.57
COL11A1P12107 CYP4F24P-201ENST00000586049 1580 ntBASIC18.64■□□□□ 0.57
COL11A1P12107 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
COL11A1P12107 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.64■□□□□ 0.57
COL11A1P12107 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
COL11A1P12107 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.64■□□□□ 0.57
COL11A1P12107 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.64■□□□□ 0.57
COL11A1P12107 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.64■□□□□ 0.57
COL11A1P12107 DFFBP1-201ENST00000433250 979 ntBASIC18.64■□□□□ 0.57
COL11A1P12107 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL11A1P12107 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.64■□□□□ 0.57
COL11A1P12107 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.64■□□□□ 0.57
COL11A1P12107 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.64■□□□□ 0.57
COL11A1P12107 CR383656.12-201ENST00000549567 513 ntBASIC18.64■□□□□ 0.57
COL11A1P12107 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.64■□□□□ 0.57
COL11A1P12107 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.64■□□□□ 0.57
COL11A1P12107 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
COL11A1P12107 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.64■□□□□ 0.57
COL11A1P12107 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL11A1P12107 PCDHB18P-201ENST00000524813 2368 ntBASIC18.64■□□□□ 0.57
COL11A1P12107 AC006538.1-201ENST00000567905 1585 ntBASIC18.64■□□□□ 0.57
COL11A1P12107 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.63■□□□□ 0.57
COL11A1P12107 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
COL11A1P12107 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.63■□□□□ 0.57
COL11A1P12107 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL11A1P12107 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL11A1P12107 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.63■□□□□ 0.57
COL11A1P12107 EEF1DP4-201ENST00000446006 880 ntBASIC18.63■□□□□ 0.57
COL11A1P12107 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.63■□□□□ 0.57
COL11A1P12107 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.63■□□□□ 0.57
COL11A1P12107 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
COL11A1P12107 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
COL11A1P12107 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.63■□□□□ 0.57
COL11A1P12107 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL11A1P12107 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms