Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRCH4O75427 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
LRCH4O75427 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 IL9RP2-201ENST00000423948 1312 ntBASIC17.33■□□□□ 0.36
LRCH4O75427 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.33■□□□□ 0.36
LRCH4O75427 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRCH4O75427 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.33■□□□□ 0.36
LRCH4O75427 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.33■□□□□ 0.36
LRCH4O75427 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 MIR3909-201ENST00000579518 119 ntBASIC17.33■□□□□ 0.36
LRCH4O75427 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.33■□□□□ 0.36
LRCH4O75427 AL031055.1-201ENST00000606362 631 ntBASIC17.33■□□□□ 0.36
LRCH4O75427 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LRCH4O75427 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LRCH4O75427 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LRCH4O75427 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.33■□□□□ 0.36
LRCH4O75427 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRCH4O75427 LINC01144-201ENST00000626198 1710 ntBASIC17.33■□□□□ 0.36
LRCH4O75427 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
LRCH4O75427 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRCH4O75427 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 RPL13AP23-201ENST00000480739 586 ntBASIC17.32■□□□□ 0.36
LRCH4O75427 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.32■□□□□ 0.36
LRCH4O75427 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.32■□□□□ 0.36
LRCH4O75427 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.32■□□□□ 0.36
LRCH4O75427 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.32■□□□□ 0.36
LRCH4O75427 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 OR6D1P-203ENST00000641209 4860 ntBASIC17.32■□□□□ 0.36
LRCH4O75427 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRCH4O75427 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRCH4O75427 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LRCH4O75427 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LRCH4O75427 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LRCH4O75427 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LRCH4O75427 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.31■□□□□ 0.36
LRCH4O75427 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRCH4O75427 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH4O75427 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.31■□□□□ 0.36
LRCH4O75427 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.31■□□□□ 0.36
LRCH4O75427 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms