Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 AC012569.1-201ENST00000591191 1524 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE3O75131 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CPNE3O75131 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CPNE3O75131 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.04■□□□□ 0.16
CPNE3O75131 ADH5P3-201ENST00000433842 1137 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 TIMM8BP1-201ENST00000452384 211 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE3O75131 CYMP-203ENST00000474680 1263 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 RN7SL589P-201ENST00000481268 310 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 PP12613-201ENST00000424958 2230 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 AC093525.9-201ENST00000624961 1746 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 AL138688.1-201ENST00000624851 1594 ntBASIC16.04■□□□□ 0.16
CPNE3O75131 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE3O75131 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE3O75131 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CPNE3O75131 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE3O75131 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE3O75131 AL353732.1-201ENST00000569618 1459 ntBASIC16.03■□□□□ 0.16
CPNE3O75131 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE3O75131 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CPNE3O75131 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE3O75131 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE3O75131 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 HCG4-201ENST00000418983 998 ntBASIC16.03■□□□□ 0.16
CPNE3O75131 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE3O75131 AL671277.1-201ENST00000429656 993 ntBASIC16.03■□□□□ 0.16
CPNE3O75131 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 AC023141.5-201ENST00000458585 616 ntBASIC16.03■□□□□ 0.16
CPNE3O75131 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CPNE3O75131 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE3O75131 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE3O75131 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 AC099522.2-201ENST00000607001 744 ntBASIC16.03■□□□□ 0.16
CPNE3O75131 AC026120.1-201ENST00000611536 926 ntBASIC16.03■□□□□ 0.16
CPNE3O75131 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE3O75131 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE3O75131 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE3O75131 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE3O75131 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE3O75131 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE3O75131 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CPNE3O75131 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE3O75131 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CPNE3O75131 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CPNE3O75131 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CPNE3O75131 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE3O75131 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms