Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 AC067863.1-201ENST00000494933 530 ntBASIC13.58□□□□□ -0.24
ZNF48Q96MX3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 AC093525.9-201ENST00000624961 1746 ntBASIC13.58□□□□□ -0.24
ZNF48Q96MX3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 EGFEM1P-202ENST00000431685 1563 ntBASIC13.58□□□□□ -0.24
ZNF48Q96MX3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF48Q96MX3 AL596257.1-201ENST00000641463 2694 ntBASIC13.57□□□□□ -0.24
ZNF48Q96MX3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 AL353732.1-201ENST00000569618 1459 ntBASIC13.57□□□□□ -0.24
ZNF48Q96MX3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 RBPMS2P1-201ENST00000437762 623 ntBASIC13.57□□□□□ -0.24
ZNF48Q96MX3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 AC124947.2-201ENST00000547118 1133 ntBASIC13.57□□□□□ -0.24
ZNF48Q96MX3 LINC01225-203ENST00000563550 1244 ntBASIC13.57□□□□□ -0.24
ZNF48Q96MX3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 AP001059.3-201ENST00000619053 235 ntBASIC13.57□□□□□ -0.24
ZNF48Q96MX3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF48Q96MX3 AC080080.1-201ENST00000625121 2420 ntBASIC13.56□□□□□ -0.24
ZNF48Q96MX3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 SLC22A20-204ENST00000530038 1673 ntBASIC13.56□□□□□ -0.24
ZNF48Q96MX3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ZNF48Q96MX3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms