Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 SNX33P1-201ENST00000592116 1762 ntBASIC17.85■□□□□ 0.45
ALPK3Q96L96 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ALPK3Q96L96 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.85■□□□□ 0.45
ALPK3Q96L96 AC093525.9-201ENST00000624961 1746 ntBASIC17.84■□□□□ 0.45
ALPK3Q96L96 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 YBX1P6-201ENST00000442962 1002 ntBASIC17.84■□□□□ 0.45
ALPK3Q96L96 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 EIF4HP1-201ENST00000453115 687 ntBASIC17.84■□□□□ 0.45
ALPK3Q96L96 RPS2P36-201ENST00000456516 831 ntBASIC17.84■□□□□ 0.45
ALPK3Q96L96 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AC005695.3-201ENST00000614522 232 ntBASIC17.84■□□□□ 0.45
ALPK3Q96L96 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AC104306.2-201ENST00000451877 341 ntBASIC17.84■□□□□ 0.45
ALPK3Q96L96 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AC079316.1-201ENST00000548397 411 ntBASIC17.84■□□□□ 0.45
ALPK3Q96L96 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ALPK3Q96L96 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ALPK3Q96L96 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALPK3Q96L96 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ALPK3Q96L96 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.83■□□□□ 0.45
ALPK3Q96L96 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
ALPK3Q96L96 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.83■□□□□ 0.45
ALPK3Q96L96 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ALPK3Q96L96 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALPK3Q96L96 AC104457.1-201ENST00000401024 814 ntBASIC17.83■□□□□ 0.44
ALPK3Q96L96 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 AC026979.3-201ENST00000607315 403 ntBASIC17.83■□□□□ 0.44
ALPK3Q96L96 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALPK3Q96L96 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ALPK3Q96L96 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALPK3Q96L96 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALPK3Q96L96 ACTG1P3-201ENST00000431775 1114 ntBASIC17.82■□□□□ 0.44
ALPK3Q96L96 HIST3H2BA-201ENST00000436555 524 ntBASIC17.82■□□□□ 0.44
ALPK3Q96L96 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ALPK3Q96L96 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ALPK3Q96L96 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.82■□□□□ 0.44
ALPK3Q96L96 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms