Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FAAHP1-202ENST00000446499 1238 ntBASIC17.66■□□□□ 0.42
TRIM11Q96F44 POU5F1P6-201ENST00000466990 990 ntBASIC17.66■□□□□ 0.42
TRIM11Q96F44 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.66■□□□□ 0.42
TRIM11Q96F44 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 LINC01144-201ENST00000626198 1710 ntBASIC17.66■□□□□ 0.42
TRIM11Q96F44 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 AL662844.4-201ENST00000606367 2838 ntBASIC17.66■□□□□ 0.42
TRIM11Q96F44 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TRIM11Q96F44 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM11Q96F44 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.65■□□□□ 0.42
TRIM11Q96F44 AP002414.3-201ENST00000589352 1468 ntBASIC17.65■□□□□ 0.42
TRIM11Q96F44 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 AC004870.1-201ENST00000315132 882 ntBASIC17.65■□□□□ 0.42
TRIM11Q96F44 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 HNRNPDP1-201ENST00000439535 754 ntBASIC17.65■□□□□ 0.42
TRIM11Q96F44 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.65■□□□□ 0.42
TRIM11Q96F44 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 AC018695.7-201ENST00000624587 2492 ntBASIC17.65■□□□□ 0.42
TRIM11Q96F44 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
TRIM11Q96F44 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM11Q96F44 PCGF3-213ENST00000620529 1899 ntBASIC17.65■□□□□ 0.42
TRIM11Q96F44 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM11Q96F44 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM11Q96F44 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM11Q96F44 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM11Q96F44 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM11Q96F44 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 AC108073.2-201ENST00000464002 357 ntBASIC17.64■□□□□ 0.41
TRIM11Q96F44 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 AC020765.3-201ENST00000613051 740 ntBASIC17.64■□□□□ 0.41
TRIM11Q96F44 AC010654.1-201ENST00000615722 808 ntBASIC17.64■□□□□ 0.41
TRIM11Q96F44 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.64■□□□□ 0.41
TRIM11Q96F44 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM11Q96F44 AC092364.2-201ENST00000596710 2692 ntBASIC17.64■□□□□ 0.41
TRIM11Q96F44 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM11Q96F44 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 AC012569.1-201ENST00000591191 1524 ntBASIC17.63■□□□□ 0.41
TRIM11Q96F44 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRIM11Q96F44 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRIM11Q96F44 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms