Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA3P29320 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA3P29320 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 SNX33P1-201ENST00000592116 1762 ntBASIC16.29■□□□□ 0.2
EPHA3P29320 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
EPHA3P29320 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.29■□□□□ 0.2
EPHA3P29320 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.29■□□□□ 0.2
EPHA3P29320 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA3P29320 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
EPHA3P29320 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 Z69720.1-201ENST00000601483 472 ntBASIC16.29■□□□□ 0.2
EPHA3P29320 TERC-201ENST00000602385 541 ntBASIC16.29■□□□□ 0.2
EPHA3P29320 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA3P29320 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA3P29320 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EPHA3P29320 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA3P29320 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EPHA3P29320 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA3P29320 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EPHA3P29320 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA3P29320 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA3P29320 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 SIGLEC16-201ENST00000599858 1437 ntBASIC16.28■□□□□ 0.2
EPHA3P29320 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHA3P29320 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 AC006449.6-201ENST00000612330 2296 ntBASIC16.28■□□□□ 0.2
EPHA3P29320 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHA3P29320 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 KRT17P6-201ENST00000453795 1220 ntBASIC16.28■□□□□ 0.2
EPHA3P29320 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHA3P29320 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.28■□□□□ 0.2
EPHA3P29320 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHA3P29320 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.28■□□□□ 0.2
EPHA3P29320 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
EPHA3P29320 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EPHA3P29320 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA3P29320 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
EPHA3P29320 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.27■□□□□ 0.2
EPHA3P29320 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 AC104640.1-201ENST00000562617 2109 ntBASIC16.27■□□□□ 0.2
EPHA3P29320 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.27■□□□□ 0.2
EPHA3P29320 AL590787.1-201ENST00000568856 1315 ntBASIC16.27■□□□□ 0.2
EPHA3P29320 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHA3P29320 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms