Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.1□□□□□ -0.63
P04940 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
P04940 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.1□□□□□ -0.63
P04940 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.1□□□□□ -0.63
P04940 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
P04940 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Gm22189-201ENSMUST00000103822 86 ntBASIC11.1□□□□□ -0.63
P04940 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Gm15321-201ENSMUST00000121290 288 ntBASIC11.1□□□□□ -0.63
P04940 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.1□□□□□ -0.63
P04940 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.1□□□□□ -0.63
P04940 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.1□□□□□ -0.63
P04940 Gm17330-201ENSMUST00000221047 165 ntBASIC11.1□□□□□ -0.63
P04940 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.1□□□□□ -0.63
P04940 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Gm9797-201ENSMUST00000052902 613 ntBASIC11.1□□□□□ -0.63
P04940 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.1□□□□□ -0.63
P04940 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
P04940 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P04940 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.09□□□□□ -0.63
P04940 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.09□□□□□ -0.63
P04940 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04940 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.09□□□□□ -0.63
P04940 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.09□□□□□ -0.63
P04940 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
P04940 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.09□□□□□ -0.63
P04940 Gm5279-201ENSMUST00000199575 745 ntBASIC11.09□□□□□ -0.63
P04940 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.09□□□□□ -0.63
P04940 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.09□□□□□ -0.63
P04940 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.09□□□□□ -0.63
P04940 Gm24447-201ENSMUST00000083977 338 ntBASIC11.09□□□□□ -0.63
P04940 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04940 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04940 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.09□□□□□ -0.63
P04940 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
P04940 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
P04940 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Syt7-204ENSMUST00000223586 1344 ntBASIC11.09□□□□□ -0.63
P04940 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04940 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P04940 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
P04940 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.08□□□□□ -0.64
P04940 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04940 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms