Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
GFRA3O60609 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GFRA3O60609 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.01■□□□□ 0.15
GFRA3O60609 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GFRA3O60609 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
GFRA3O60609 BCL2-203ENST00000589955 5011 ntBASIC16.01■□□□□ 0.15
GFRA3O60609 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GFRA3O60609 AC098818.2-201ENST00000564925 2320 ntBASIC16.01■□□□□ 0.15
GFRA3O60609 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GFRA3O60609 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GFRA3O60609 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.01■□□□□ 0.15
GFRA3O60609 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.01■□□□□ 0.15
GFRA3O60609 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16■□□□□ 0.15
GFRA3O60609 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16■□□□□ 0.15
GFRA3O60609 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16■□□□□ 0.15
GFRA3O60609 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16■□□□□ 0.15
GFRA3O60609 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
GFRA3O60609 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16■□□□□ 0.15
GFRA3O60609 AL591846.1-201ENST00000451736 433 ntBASIC16■□□□□ 0.15
GFRA3O60609 RN7SL720P-201ENST00000488178 304 ntBASIC16■□□□□ 0.15
GFRA3O60609 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16■□□□□ 0.15
GFRA3O60609 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16■□□□□ 0.15
GFRA3O60609 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16■□□□□ 0.15
GFRA3O60609 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16■□□□□ 0.15
GFRA3O60609 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16■□□□□ 0.15
GFRA3O60609 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16■□□□□ 0.15
GFRA3O60609 AP006547.1-201ENST00000563435 692 ntBASIC16■□□□□ 0.15
GFRA3O60609 EEF1DP1-201ENST00000585891 896 ntBASIC16■□□□□ 0.15
GFRA3O60609 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16■□□□□ 0.15
GFRA3O60609 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16■□□□□ 0.15
GFRA3O60609 AC244669.2-201ENST00000612320 853 ntBASIC16■□□□□ 0.15
GFRA3O60609 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
GFRA3O60609 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
GFRA3O60609 CU633904.3-201ENST00000624042 1029 ntBASIC16■□□□□ 0.15
GFRA3O60609 CFTRP2-201ENST00000634304 199 ntBASIC16■□□□□ 0.15
GFRA3O60609 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16■□□□□ 0.15
GFRA3O60609 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
GFRA3O60609 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
GFRA3O60609 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
GFRA3O60609 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
GFRA3O60609 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 AC005332.7-201ENST00000614046 2005 ntBASIC15.99■□□□□ 0.15
GFRA3O60609 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.99■□□□□ 0.15
GFRA3O60609 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
GFRA3O60609 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.99■□□□□ 0.15
GFRA3O60609 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.99■□□□□ 0.15
GFRA3O60609 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 FTLP10-202ENST00000505798 471 ntBASIC15.99■□□□□ 0.15
GFRA3O60609 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.99■□□□□ 0.15
GFRA3O60609 KRT90P-201ENST00000549264 1064 ntBASIC15.99■□□□□ 0.15
GFRA3O60609 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
GFRA3O60609 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.99■□□□□ 0.15
GFRA3O60609 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.99■□□□□ 0.15
GFRA3O60609 AC097724.1-201ENST00000609581 426 ntBASIC15.99■□□□□ 0.15
GFRA3O60609 AC005695.3-201ENST00000614522 232 ntBASIC15.99■□□□□ 0.15
GFRA3O60609 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.99■□□□□ 0.15
GFRA3O60609 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.99■□□□□ 0.15
GFRA3O60609 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
GFRA3O60609 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.99■□□□□ 0.15
GFRA3O60609 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
GFRA3O60609 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms